Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1556X
         (384 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC...    29   1.6  
AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB...    29   1.6  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    27   6.3  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    27   8.4  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    27   8.4  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    27   8.4  

>AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC,
           isoform C protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 74  ETHYCYTAEIGGVVVPTRADSQE 6
           ET YCY    GG+VV  R++ +E
Sbjct: 365 ETMYCYKDSYGGIVVSPRSEGEE 387


>AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB,
           isoform B protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 74  ETHYCYTAEIGGVVVPTRADSQE 6
           ET YCY    GG+VV  R++ +E
Sbjct: 334 ETMYCYKDSYGGIVVSPRSEGEE 356


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 188 YKVVTGAHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81
           + ++  AH H Q KC    E E+   + ++NG P+L
Sbjct: 228 FLILIFAHEHLQWKCVA--EFELCLEEIAFNGTPSL 261


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81
           AH H Q KC    E E+   + ++NG P+L
Sbjct: 50  AHEHLQWKCVA--EFELCLEEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81
           AH H Q KC    E E+   + ++NG P+L
Sbjct: 50  AHEHLQWKCVA--EFELCLEEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81
           AH H Q KC    E E+   + ++NG P+L
Sbjct: 272 AHEHLQWKCVA--EFELCLEEIAFNGTPSL 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,655,204
Number of Sequences: 53049
Number of extensions: 341871
Number of successful extensions: 793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)