BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1556X (384 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE013599-1510|AAM68695.1| 555|Drosophila melanogaster CG8819-PC... 29 1.6 AE013599-1507|AAO41402.1| 524|Drosophila melanogaster CG8821-PB... 29 1.6 AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 27 6.3 EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 27 8.4 EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 27 8.4 EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 27 8.4 >AE013599-1510|AAM68695.1| 555|Drosophila melanogaster CG8819-PC, isoform C protein. Length = 555 Score = 29.5 bits (63), Expect = 1.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 74 ETHYCYTAEIGGVVVPTRADSQE 6 ET YCY GG+VV R++ +E Sbjct: 365 ETMYCYKDSYGGIVVSPRSEGEE 387 >AE013599-1507|AAO41402.1| 524|Drosophila melanogaster CG8821-PB, isoform B protein. Length = 524 Score = 29.5 bits (63), Expect = 1.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 74 ETHYCYTAEIGGVVVPTRADSQE 6 ET YCY GG+VV R++ +E Sbjct: 334 ETMYCYKDSYGGIVVSPRSEGEE 356 >AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA protein. Length = 1782 Score = 27.5 bits (58), Expect = 6.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -2 Query: 188 YKVVTGAHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81 + ++ AH H Q KC E E+ + ++NG P+L Sbjct: 228 FLILIFAHEHLQWKCVA--EFELCLEEIAFNGTPSL 261 >EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire protein. Length = 1396 Score = 27.1 bits (57), Expect = 8.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81 AH H Q KC E E+ + ++NG P+L Sbjct: 50 AHEHLQWKCVA--EFELCLEEIAFNGTPSL 77 >EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire protein. Length = 1437 Score = 27.1 bits (57), Expect = 8.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81 AH H Q KC E E+ + ++NG P+L Sbjct: 50 AHEHLQWKCVA--EFELCLEEIAFNGTPSL 77 >EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire protein. Length = 1659 Score = 27.1 bits (57), Expect = 8.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 170 AHRHPQHKCTTHLEIEVLRSQYSYNGCPAL 81 AH H Q KC E E+ + ++NG P+L Sbjct: 272 AHEHLQWKCVA--EFELCLEEIAFNGTPSL 299 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,655,204 Number of Sequences: 53049 Number of extensions: 341871 Number of successful extensions: 793 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 777 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 793 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1045179750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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