Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1556X
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical pr... 30 0.49
U42437-2|AAW88401.1| 294|Caenorhabditis elegans Hypothetical pr... 28 2.6
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z93383-13|CAI58636.1| 206|Caenorhabditis elegans Hypothetical p... 27 3.4
Z93383-12|CAB07628.2| 283|Caenorhabditis elegans Hypothetical p... 27 3.4
Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical p... 27 3.4
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 27 3.4
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 27 3.4
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 27 3.4
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 27 3.4
AL023816-1|CAA19430.2| 250|Caenorhabditis elegans Hypothetical ... 27 4.5
Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z75955-7|CAB00121.1| 550|Caenorhabditis elegans Hypothetical pr... 27 6.0
>Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical
protein T06E6.11 protein.
Length = 279
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 336 YNRYIVPGAYFSNLCDDVMQCQNIQILNTKCHYLFFL 226
+N+YI+ G Y N+ D ++C N + +C+Y F+L
Sbjct: 138 FNQYILFG-YCRNVIDVPLECDNFKCTVNECYYGFWL 173
>U42437-2|AAW88401.1| 294|Caenorhabditis elegans Hypothetical
protein F30B5.8 protein.
Length = 294
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = -1
Query: 339 FYNRYIVPGAYFSNLCDDVMQCQNIQILNTKCHYLFFL 226
F+++Y++ G Y +N+ D ++C N + +C++ F++
Sbjct: 137 FFDQYMMFG-YCNNVFDVPLECDNAKCAYNQCYFEFWM 173
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 166 WAPVTTLYQMSYQL-VRPYKQ 225
WA TT+Y+M+YQ RPY++
Sbjct: 687 WAVATTVYEMAYQCRQRPYEE 707
>Z93383-13|CAI58636.1| 206|Caenorhabditis elegans Hypothetical
protein F54B8.7b protein.
Length = 206
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -1
Query: 336 YNRYIVPGAYFSNLCDDVMQCQNIQILNTKCHYLFFLLLIWADELIAHLV 187
+N+Y++ G Y N D ++C + + C+Y ++L E I H V
Sbjct: 61 FNQYVLFG-YCGNSIDVPLECDDFKCTVNSCYYNYYL----TQEQIVHFV 105
>Z93383-12|CAB07628.2| 283|Caenorhabditis elegans Hypothetical
protein F54B8.7a protein.
Length = 283
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -1
Query: 336 YNRYIVPGAYFSNLCDDVMQCQNIQILNTKCHYLFFLLLIWADELIAHLV 187
+N+Y++ G Y N D ++C + + C+Y ++L E I H V
Sbjct: 138 FNQYVLFG-YCGNSIDVPLECDDFKCTVNSCYYNYYL----TQEQIVHFV 182
>Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical
protein C44C10.9b protein.
Length = 234
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -2
Query: 362 KKDANKASSTIGT*YPELISQTYATTLCSAKTYKYLIPNAIISFFYCLYGR 210
KKDAN SST G Y L + + + KY P+ I Y YGR
Sbjct: 97 KKDANATSSTTGNKYSALRNNGELVDEYAFQEQKYSTPDDI----YSAYGR 143
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 315 GAYFSNLCDDVMQCQNIQILNTKCHYLF 232
GA NL D + +NI +LN C Y +
Sbjct: 599 GACSENLVSDFFEHRNIAVLNRYCRYFY 626
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 315 GAYFSNLCDDVMQCQNIQILNTKCHYLF 232
GA NL D + +NI +LN C Y +
Sbjct: 599 GACSENLVSDFFEHRNIAVLNRYCRYFY 626
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 315 GAYFSNLCDDVMQCQNIQILNTKCHYLF 232
GA NL D + +NI +LN C Y +
Sbjct: 599 GACSENLVSDFFEHRNIAVLNRYCRYFY 626
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 315 GAYFSNLCDDVMQCQNIQILNTKCHYLF 232
GA NL D + +NI +LN C Y +
Sbjct: 599 GACSENLVSDFFEHRNIAVLNRYCRYFY 626
>AL023816-1|CAA19430.2| 250|Caenorhabditis elegans Hypothetical
protein T05G11.2 protein.
Length = 250
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 333 NRYIVPGAYFSNLCDDVMQCQNIQILNTKCHYLFFL 226
N+Y++ G Y N+ D +QC + C+Y ++L
Sbjct: 139 NQYVLFG-YCGNVIDTPLQCSSFFCAINSCYYYYWL 173
>Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.9 protein.
Length = 286
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 339 FYNRYIVPGAYFSNLCDDVMQCQNIQILNTKCH 241
F+++YI+ G Y N+ D ++C N Q +C+
Sbjct: 137 FFDQYILFG-YCKNVIDVPLECDNFQCSVNQCY 168
>Z75955-7|CAB00121.1| 550|Caenorhabditis elegans Hypothetical
protein R07B7.12 protein.
Length = 550
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 354 CE*GKFYNRYIVPGAYFSNLCDDVMQCQNIQILNTKC 244
C FY+ Y V FS +C + CQ Q + KC
Sbjct: 480 CYNESFYHPYFVEKKDFSQICPNADNCQLPQREDIKC 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,029,926
Number of Sequences: 27780
Number of extensions: 174581
Number of successful extensions: 427
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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