BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1550X (607 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q969A4 Cluster: Complement component C3; n=2; Branchios... 40 0.060 UniRef50_A5PMH2 Cluster: Novel protein; n=3; Deuterostomia|Rep: ... 39 0.11 UniRef50_Q4RUJ7 Cluster: Chromosome 1 SCAF14995, whole genome sh... 38 0.14 UniRef50_Q4P2Z2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43 UniRef50_Q8FN88 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3 UniRef50_UPI00004D9550 Cluster: UPI00004D9550 related cluster; n... 35 1.7 UniRef50_A3M7D9 Cluster: Putative calcium binding hemolysin prot... 33 6.9 UniRef50_Q73JW2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2 >UniRef50_Q969A4 Cluster: Complement component C3; n=2; Branchiostoma|Rep: Complement component C3 - Branchiostoma belcheri (Amphioxus) Length = 1732 Score = 39.5 bits (88), Expect = 0.060 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = +3 Query: 51 TVNPVVLDGANISSTCPVCVTYEARSKFVITSLRPAFAKIYPSTRPDLAVETFFHARPGS 230 T N VL + ++ +CV+ + ++ +++P +Y +PD A TF+H GS Sbjct: 1505 TTNRAVLLYFDEITSEEICVSIRMKRVMLVGAVQPVPVSVYDYYQPDEACTTFYHPGQGS 1564 Query: 231 PLLRGITD 254 PLL + D Sbjct: 1565 PLLATLCD 1572 >UniRef50_A5PMH2 Cluster: Novel protein; n=3; Deuterostomia|Rep: Novel protein - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 734 Score = 38.7 bits (86), Expect = 0.11 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +3 Query: 84 ISSTCPVCVTYEARSKFVITSLRPAFAKIYPSTRPDLAVETFFHARPGSPLLRGITDTTS 263 I S C CV + A ++++ P K+Y P F++ SPL R + D T+ Sbjct: 502 IPSQCMTCVAFNAVREYIVGKTAPVPVKVYDYYEPAFEATRFYNVSESSPLARELCDGTT 561 >UniRef50_Q4RUJ7 Cluster: Chromosome 1 SCAF14995, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1 SCAF14995, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 1760 Score = 38.3 bits (85), Expect = 0.14 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 84 ISSTCPVCVTYEARSKFVITSLRPAFAKIYPSTRPDLAVETFFHARPGSPLLRGITD 254 I S C CV ++A ++V+ P KIY P F++ SPL R + D Sbjct: 1619 IPSQCMTCVAFKAVREYVVGKTAPVPVKIYDYYEPAFEATRFYNVSENSPLARELCD 1675 >UniRef50_Q4P2Z2 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 608 Score = 36.7 bits (81), Expect = 0.43 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -1 Query: 220 RAWKKVSTARSGLVDG*ILANAGRRLVITNLDLASYVTHTGHVE-LILAPSNTTGF 56 +AWKK+S+ G VD +L NAG LV T++ A ++ T HVE ++ P N F Sbjct: 240 QAWKKISSLTGGRVD-IVLDNAGFELV-TDMIFADWLLTTPHVEQVVFHPKNMPWF 293 >UniRef50_Q8FN88 Cluster: Putative uncharacterized protein; n=1; Corynebacterium efficiens|Rep: Putative uncharacterized protein - Corynebacterium efficiens Length = 318 Score = 35.1 bits (77), Expect = 1.3 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +3 Query: 213 HARPGSPLLRGITDTTS*LGSIKLNWLV*KRTPTSIIFVSVDEFVVEIT 359 H PG P G T T G + N L RTPT +I+ D+F ++T Sbjct: 231 HLAPGDPGAIGATATGGIFGQLPSNSLETARTPTRMIYCLPDDFACDVT 279 >UniRef50_UPI00004D9550 Cluster: UPI00004D9550 related cluster; n=2; Xenopus tropicalis|Rep: UPI00004D9550 UniRef100 entry - Xenopus tropicalis Length = 1178 Score = 34.7 bits (76), Expect = 1.7 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +3 Query: 84 ISSTCPVCVTYEARSKFVITSLRPAFAKIYPSTRPDLAVETFFHARPGSPL 236 IS T P CV + A FV+ ++PA +Y P+ F+H S L Sbjct: 1011 ISHTEPECVKFYAHQYFVVGLVQPASVTVYDYYTPENRCTKFYHVNESSAL 1061 >UniRef50_A3M7D9 Cluster: Putative calcium binding hemolysin protein; n=1; Acinetobacter baumannii ATCC 17978|Rep: Putative calcium binding hemolysin protein - Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) Length = 594 Score = 32.7 bits (71), Expect = 6.9 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +3 Query: 6 IIRLESSLFSG---YELHTVNPVVLDGANISSTCPVCVTYEARSKFVITSLRPAFAKIYP 176 I++L L S + + + V +D A + +T V V Y R+ T+ P F I+P Sbjct: 373 IVKLTGYLASNNKNFSIQFADGVTIDRAQLDTT--VGVNYWVRALVATTNSNPDFKYIFP 430 Query: 177 STRPDLAVE 203 ST PD ++ Sbjct: 431 STAPDYLLD 439 >UniRef50_Q73JW2 Cluster: Putative uncharacterized protein; n=1; Treponema denticola|Rep: Putative uncharacterized protein - Treponema denticola Length = 582 Score = 32.3 bits (70), Expect = 9.2 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +3 Query: 21 SSLFSGYELHTVN-PVVLDGANISSTCPVCVTYEARSKFVITSLRPAFAKIYPSTRPDLA 197 +S F +VN P+++ GA S V E R + + ++ AF+ +YP RPD Sbjct: 201 NSCFGSLIEKSVNKPIIVIGAGPSLDSSVEFIKENRDRLFVLAVDAAFSGLYPEIRPDAV 260 Query: 198 V 200 V Sbjct: 261 V 261 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 559,386,157 Number of Sequences: 1657284 Number of extensions: 10541210 Number of successful extensions: 22828 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 22281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22824 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 43147568152 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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