Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1545
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.6  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   3.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.9  

>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 591 NTSCPIKHDKPISCCCTSSCLCQMLKYLSVSSFTA 487
           N    IKH K  + CC  +C     KY S+SS  A
Sbjct: 192 NKKIQIKHTKTKNGCCRKTCGTGW-KYRSISSLHA 225


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 473 SQKSHRFHFHQPHH 432
           SQ  H  H H PHH
Sbjct: 181 SQHHHHHHHHHPHH 194


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 609  CCLGKCWSNIKEQINVARIDASLAGVNTAKRF 704
            C +GKCWS + +  + A+   ++   N   R+
Sbjct: 953  CNVGKCWSEVLQSADFAKRREAVEKFNEEHRW 984


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 257 NCETCKXLEQHVESLQE 307
           NC T + LEQ  + LQE
Sbjct: 270 NCATAQTLEQEAKELQE 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,101
Number of Sequences: 2352
Number of extensions: 12236
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)