Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1543
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    27   0.19 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.58 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.76 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.76 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   1.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 225 VVSTAEGLI*RHLTIRLDSMLEAVQLPAGVANLYAGLT 112
           V+S    ++  +LT ++D+  E++ L +G  +LY G+T
Sbjct: 43  VLSLGSFIVSVYLTTKIDNDGESISLASGWLDLYLGIT 80


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 429 DVVLDRIRKLADQCTGLQGF 488
           DVV    RK A+ C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +2

Query: 215  VETTPLTRSSARPGGKARATS--CLC*FGTNCS--RRGSYRHLPSTVPPRAAHHWQRG 376
            V   P+T +++RP G   +     +C F TN +  R+G  ++LPS + P    H   G
Sbjct: 2300 VPDKPVTTTTSRPIGTDTSDDYKVVCYF-TNWAWYRQGDGKYLPSDIDPSLCTHINYG 2356



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 332  PSTVPPRAAHHWQ 370
            PS  PP   +HWQ
Sbjct: 1172 PSYRPPSTTNHWQ 1184


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 531 VNPEPVPPRTSETRGNPEALC 469
           V P P+PP  + T  NP A+C
Sbjct: 180 VPPLPLPPIFAPTMINPSAIC 200


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 354 QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 455
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 354 QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 455
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 354 QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 455
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 531 VNPEPVPPRTSETRGNPEALC 469
           V P P+PP    T  NP A+C
Sbjct: 180 VPPLPLPPIFPPTMINPSAIC 200


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 109 IGQAGVQIGNACWELYCLEHGIQPDGQMPSD 201
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 387 NYARGHYTIGKEIVDVVLDRIRKLADQCTG 476
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 491 EETLKPCALVSQLPDPVQNYV 429
           E TL PCA  ++ PD  Q+++
Sbjct: 127 ETTLTPCASPNRKPDDNQDHL 147


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/51 (21%), Positives = 20/51 (39%)
 Frame = -1

Query: 528 NPEPVPPRTSETRGNPEALCIGQPAS*SCPKLRLRSPCQWYNVLGHSYWQH 376
           +P   PP  + + G+P ++     A    P  R    C+   +  H  W +
Sbjct: 29  SPAAAPPPATTSSGSPASVASNASAPLHIPAKRAAYDCEGV-IRHHGQWNY 78


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 495 FHSFGVEPAPDSHHF*WSVSPLTTERSPS 581
           FHS G +   +      SVSPLT+ R P+
Sbjct: 898 FHSNGAKEEDEDKP---SVSPLTSPRQPA 923


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 142 CWELYCLEHGIQPDGQMPSDKT 207
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 111 RSSRRTDWQRLLGAV 155
           ++++  DWQ++ GAV
Sbjct: 462 KNAKDVDWQKIAGAV 476


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 299 NCSRRGSYRHLPSTVPPR 352
           NC +R  + +LP +  PR
Sbjct: 432 NCQKRHPFAYLPFSAGPR 449


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 494 HEETLKPCALVSQLPDPVQN 435
           H+E++KP   ++ +P  + N
Sbjct: 342 HDESIKPLLTLNSVPTEIYN 361


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 299 NCSRRGSYRHLPSTVPPR 352
           NC +R  + +LP +  PR
Sbjct: 432 NCQKRHPFAYLPFSAGPR 449


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 592 HLSCSTGVHSGGGTLQLDP 648
           H   +  V  GGG +Q DP
Sbjct: 29  HYGAAVQVPQGGGAVQPDP 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,340
Number of Sequences: 336
Number of extensions: 3890
Number of successful extensions: 27
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)