Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1543
(684 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 62 2e-11
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 58 2e-10
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 58 2e-10
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 58 2e-10
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 58 2e-10
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 27 0.42
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 1.7
AF457564-1|AAL68794.1| 91|Anopheles gambiae hypothetical prote... 24 3.9
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 62.1 bits (144), Expect = 2e-11
Identities = 35/91 (38%), Positives = 43/91 (47%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGRES 264
MRECISVH+GQAGVQIGN CW+ + P + + S
Sbjct: 1 MRECISVHVGQAGVQIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAS 60
Query: 265 TCHELSLLIWNQL*STRFVPALTVNCSTPSS 357
TC IW++ S R PA T +CST SS
Sbjct: 61 TCPVPCSSIWSRPSSMRCAPARTASCSTRSS 91
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 58.4 bits (135), Expect = 2e-10
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661
GF + GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H
Sbjct: 28 GFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQ 87
Query: 662 NLEHSD 679
+E++D
Sbjct: 88 LVENTD 93
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 402 HYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFG 509
HYT G E+VD VLD +RK + C LQGF + HS G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLG 36
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 58.4 bits (135), Expect = 2e-10
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661
GF + GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H
Sbjct: 28 GFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQ 87
Query: 662 NLEHSD 679
+E++D
Sbjct: 88 LVENTD 93
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 402 HYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFG 509
HYT G E+VD VLD +RK + C LQGF + HS G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLG 36
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 58.4 bits (135), Expect = 2e-10
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661
GF + GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H
Sbjct: 28 GFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQ 87
Query: 662 NLEHSD 679
+E++D
Sbjct: 88 LVENTD 93
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 402 HYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFG 509
HYT G E+VD VLD +RK + C LQGF + HS G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLG 36
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 58.4 bits (135), Expect = 2e-10
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661
GF + GGTGSG +LL+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H
Sbjct: 28 GFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQ 87
Query: 662 NLEHSD 679
+E++D
Sbjct: 88 LVENTD 93
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 402 HYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFG 509
HYT G E+VD VLD +RK + C LQGF + HS G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLG 36
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 27.5 bits (58), Expect = 0.42
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -3
Query: 199 LTASDHQAGFHARGSTAPSRRCQSVRRLDR--CERRCIPS-FCK 77
+ +D + ++ GS+ R C+++RR D C + C+ FC+
Sbjct: 56 IECTDPREVYNECGSSCDDRTCENIRRGDHLACTKHCVEGCFCR 99
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.4 bits (53), Expect = 1.7
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Frame = +1
Query: 163 EHGIQPDGQMPSDKTL--------GGGDDSF-NTFFSETGRESTCHELS---LLIWNQL* 306
++G Q Q P D TL GGG S + F++ S C ++ L N L
Sbjct: 1198 DYGNQQQQQQPQDSTLGNDRGAGEGGGSRSVPPSTFAQNSNASNCSSVNYNKLKANNGLS 1257
Query: 307 STRFVPALTVNCSTPSSSSLAKRMLPITMPEDII 408
+T P L+ T ++S+L M+ M E II
Sbjct: 1258 TTTVPPPLSGTGQTTTNSNLLTSMM--LMDESII 1289
>AF457564-1|AAL68794.1| 91|Anopheles gambiae hypothetical protein
17 protein.
Length = 91
Score = 24.2 bits (50), Expect = 3.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 440 GQDQEAG*PMHRASGFPRVSLVRGGTGSGFTSLL 541
G D+ A PMH R+++ GG G S L
Sbjct: 58 GNDKRATPPMHSLGSGARMAMTGGGILGGIFSAL 91
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,815
Number of Sequences: 2352
Number of extensions: 18383
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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