BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1543 (684 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 167 5e-42 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 167 5e-42 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 167 5e-42 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 167 5e-42 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 167 8e-42 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 167 8e-42 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 159 2e-39 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 105 2e-23 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 104 6e-23 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 103 8e-23 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 102 2e-22 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 102 2e-22 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 102 3e-22 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 100 1e-21 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 100 1e-21 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 4e-21 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 1e-10 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10 At5g11510.1 68418.m01343 myb family transcription factor (MYB3R4... 31 0.54 At2g40070.1 68415.m04923 expressed protein 31 0.71 At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 30 1.6 At5g45120.1 68418.m05539 aspartyl protease family protein contai... 29 2.9 At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 29 2.9 At4g19860.1 68417.m02910 lecithin:cholesterol acyltransferase fa... 29 3.8 At3g03780.2 68416.m00387 5-methyltetrahydropteroyltriglutamate--... 29 3.8 At3g03780.1 68416.m00386 5-methyltetrahydropteroyltriglutamate--... 29 3.8 At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 29 3.8 At5g20980.1 68418.m02494 5-methyltetrahydropteroyltriglutamate--... 28 5.0 At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 28 5.0 At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 28 5.0 At2g35670.1 68415.m04375 transcription factor, putative / fertil... 28 6.6 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 167 bits (407), Expect = 5e-42 Identities = 76/85 (89%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDRIRKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRIRKLADNCTGLQGFLVFNAVG 142 Score = 126 bits (305), Expect = 1e-29 Identities = 51/57 (89%), Positives = 56/57 (98%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETG 57 Score = 102 bits (245), Expect = 2e-22 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 167 bits (407), Expect = 5e-42 Identities = 76/85 (89%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDRIRKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRIRKLADNCTGLQGFLVFNAVG 142 Score = 126 bits (305), Expect = 1e-29 Identities = 51/57 (89%), Positives = 56/57 (98%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETG 57 Score = 102 bits (245), Expect = 2e-22 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 167 bits (407), Expect = 5e-42 Identities = 76/85 (89%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDRIRKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRIRKLADNCTGLQGFLVFNAVG 142 Score = 128 bits (309), Expect = 3e-30 Identities = 52/57 (91%), Positives = 57/57 (100%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETG 57 Score = 102 bits (245), Expect = 2e-22 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 167 bits (407), Expect = 5e-42 Identities = 76/85 (89%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDRIRKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRIRKLADNCTGLQGFLVFNAVG 142 Score = 128 bits (309), Expect = 3e-30 Identities = 52/57 (91%), Positives = 57/57 (100%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETG 57 Score = 102 bits (245), Expect = 2e-22 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 167 bits (405), Expect = 8e-42 Identities = 74/85 (87%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDR+RKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRVRKLADNCTGLQGFLVFNAVG 142 Score = 109 bits (263), Expect = 1e-24 Identities = 45/57 (78%), Positives = 51/57 (89%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MPSD T+G D+FNTFFSETG Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETG 57 Score = 104 bits (249), Expect = 6e-23 Identities = 49/66 (74%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 167 bits (405), Expect = 8e-42 Identities = 74/85 (87%), Positives = 82/85 (96%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 AGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVD+ Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDL 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 LDR+RKLAD CTGLQGFLVF++ G Sbjct: 118 CLDRVRKLADNCTGLQGFLVFNAVG 142 Score = 109 bits (263), Expect = 1e-24 Identities = 45/57 (78%), Positives = 51/57 (89%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 255 MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MPSD T+G D+FNTFFSETG Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETG 57 Score = 104 bits (249), Expect = 6e-23 Identities = 49/66 (74%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 159 bits (386), Expect = 2e-39 Identities = 69/85 (81%), Positives = 81/85 (95%) Frame = +3 Query: 255 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDV 434 +G+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD Sbjct: 58 SGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDT 117 Query: 435 VLDRIRKLADQCTGLQGFLVFHSFG 509 L+R+RKLAD CTGLQGFLVF++ G Sbjct: 118 CLERLRKLADNCTGLQGFLVFNAVG 142 Score = 107 bits (257), Expect = 7e-24 Identities = 44/56 (78%), Positives = 50/56 (89%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSET 252 MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MPSD T+G D+FNTFFSET Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSET 56 Score = 102 bits (245), Expect = 2e-22 Identities = 48/66 (72%), Positives = 57/66 (86%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + V GGTGSG SLL+ERLSVD+GKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS 193 Query: 662 NLEHSD 679 LEH+D Sbjct: 194 LLEHTD 199 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 105 bits (253), Expect = 2e-23 Identities = 45/84 (53%), Positives = 60/84 (71%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 44.0 bits (99), Expect = 9e-05 Identities = 19/42 (45%), Positives = 25/42 (59%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG+ WE+ C EHGI P G+ + L Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDL 42 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 104 bits (249), Expect = 6e-23 Identities = 44/84 (52%), Positives = 60/84 (71%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLG 141 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 133 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 192 Query: 662 NLEHSD 679 +E++D Sbjct: 193 LVENAD 198 Score = 44.8 bits (101), Expect = 5e-05 Identities = 19/39 (48%), Positives = 24/39 (61%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 201 MRE + V GQ G QIG+ WE+ C EHG+ P G+ D Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 103 bits (248), Expect = 8e-23 Identities = 45/84 (53%), Positives = 60/84 (71%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 63.3 bits (147), Expect = 1e-10 Identities = 27/66 (40%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + + FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 41.1 bits (92), Expect = 7e-04 Identities = 19/42 (45%), Positives = 24/42 (57%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG+ WE+ LEHGI G+ D L Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL 42 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 102 bits (245), Expect = 2e-22 Identities = 45/84 (53%), Positives = 59/84 (70%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 41.5 bits (93), Expect = 5e-04 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG WE+ C EHGI G+ + L Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL 42 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 102 bits (245), Expect = 2e-22 Identities = 43/84 (51%), Positives = 60/84 (71%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLG 141 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 133 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 192 Query: 662 NLEHSD 679 +E++D Sbjct: 193 LVENAD 198 Score = 42.3 bits (95), Expect = 3e-04 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 249 MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNE 54 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 102 bits (244), Expect = 3e-22 Identities = 44/84 (52%), Positives = 60/84 (71%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 63.3 bits (147), Expect = 1e-10 Identities = 27/66 (40%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + + FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 43.6 bits (98), Expect = 1e-04 Identities = 23/55 (41%), Positives = 29/55 (52%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 249 MRE + + GQ G QIG WE+ C EHGI GQ D L + N +F+E Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNE 53 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 100 bits (239), Expect = 1e-21 Identities = 44/84 (52%), Positives = 58/84 (69%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 46.4 bits (105), Expect = 2e-05 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG WE+ C EHGI P G+ D L Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL 42 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 100 bits (239), Expect = 1e-21 Identities = 44/84 (52%), Positives = 58/84 (69%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ C LQGF V HS G Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140 Score = 64.1 bits (149), Expect = 8e-11 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + L FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 46.4 bits (105), Expect = 2e-05 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG WE+ C EHGI P G+ D L Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL 42 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 98.3 bits (234), Expect = 4e-21 Identities = 43/84 (51%), Positives = 59/84 (70%) Frame = +3 Query: 258 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 437 GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116 Query: 438 LDRIRKLADQCTGLQGFLVFHSFG 509 LD +RK A+ LQGF V HS G Sbjct: 117 LDVVRKEAENSDCLQGFQVCHSLG 140 Score = 63.3 bits (147), Expect = 1e-10 Identities = 27/66 (40%), Positives = 44/66 (66%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 661 GF + GGTGSG +LL+ ++ +Y + + FS++P+P+VS VVEPYN+ L+ H Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ 191 Query: 662 NLEHSD 679 +E++D Sbjct: 192 LVENAD 197 Score = 42.7 bits (96), Expect = 2e-04 Identities = 20/42 (47%), Positives = 23/42 (54%) Frame = +1 Query: 85 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTL 210 MRE + + GQ G QIG WE+ C EHGI GQ D L Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL 42 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 63.3 bits (147), Expect = 1e-10 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%) Frame = +3 Query: 264 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVV 437 ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + + Sbjct: 60 YIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEI 118 Query: 438 LDRIRKLADQCTGLQGFLVFHS 503 +D I + AD L+GF++ HS Sbjct: 119 MDMIDREADGSDSLEGFVLCHS 140 Score = 53.6 bits (123), Expect = 1e-07 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTH 658 GF + GGTGSG S L+E L+ Y KK +S++P + S VV+PYNS+LT Sbjct: 134 GFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLK 193 Query: 659 TNLEHSDC 682 ++DC Sbjct: 194 RLTLNADC 201 Score = 48.0 bits (109), Expect = 6e-06 Identities = 24/52 (46%), Positives = 30/52 (57%) Frame = +1 Query: 88 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFF 243 RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 62.9 bits (146), Expect = 2e-10 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%) Frame = +3 Query: 264 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVV 437 ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + + Sbjct: 60 YIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEI 118 Query: 438 LDRIRKLADQCTGLQGFLVFHS 503 +D I + AD L+GF++ HS Sbjct: 119 MDMIDREADGSDSLEGFVLCHS 140 Score = 53.6 bits (123), Expect = 1e-07 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = +2 Query: 482 GFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTH 658 GF + GGTGSG S L+E L+ Y KK +S++P + S VV+PYNS+LT Sbjct: 134 GFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLK 193 Query: 659 TNLEHSDC 682 ++DC Sbjct: 194 RLTLNADC 201 Score = 48.0 bits (109), Expect = 6e-06 Identities = 24/52 (46%), Positives = 30/52 (57%) Frame = +1 Query: 88 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFF 243 RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52 >At5g11510.1 68418.m01343 myb family transcription factor (MYB3R4) contains Pfam profile: PF00249 myb-like DNA-binding domain Length = 961 Score = 31.5 bits (68), Expect = 0.54 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -1 Query: 624 TAVDTCGAG*MENSSLDFFP*STERRSIRSDVNPEPVPPRTSETRGNPEALCIGQPAS*S 445 TA G G + + L P ++S +P V P+ + T GN +CIG P+S + Sbjct: 439 TATAASGKGTLRPAPLIISPDKYSKKSSGLICHPFEVEPKCT-TNGNGSFICIGDPSSST 497 Query: 444 C 442 C Sbjct: 498 C 498 >At2g40070.1 68415.m04923 expressed protein Length = 607 Score = 31.1 bits (67), Expect = 0.71 Identities = 22/89 (24%), Positives = 35/89 (39%) Frame = +2 Query: 89 GNASPFTSVKPAYRLATPAGSCTASSMESSLMVRCRQIRPSAVETTPLTRSSARPGGKAR 268 G +S T+ + R +TP T SS + R + + TP++RS++ + Sbjct: 191 GRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLT 250 Query: 269 ATSCLC*FGTNCSRRGSYRHLPSTVPPRA 355 T+ T S R PST A Sbjct: 251 PTASKPTTSTARSAGSVTRSTPSTTTKSA 279 >At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to RING finger rngB protein, cytosolic - Dictyostelium discoideum, PIR:S68824; contains Pfam profiles PF01344: Kelch motif, PF00887: Acyl CoA binding protein (ACBP) Length = 648 Score = 29.9 bits (64), Expect = 1.6 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = -2 Query: 638 CKVPPP-LWTPVEQDRWKT 585 C +P P W PVEQ +WK+ Sbjct: 60 CSIPKPSAWNPVEQSKWKS 78 >At5g45120.1 68418.m05539 aspartyl protease family protein contains Pfam profile: PF00026 eukaryotic aspartyl protease Length = 491 Score = 29.1 bits (62), Expect = 2.9 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -3 Query: 514 STPNE*NTRKP*SPVHWSASFLILSKTTSTISLP 413 +T N+ R+ +P S+SFL+L+ T S++SLP Sbjct: 19 NTTNKTQARQHKNPSSSSSSFLVLTLTKSSVSLP 52 >At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase / vitamin-B12-independent methionine synthase / cobalamin-independent methionine synthase (CIMS) identical to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana} Length = 765 Score = 29.1 bits (62), Expect = 2.9 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = -2 Query: 674 SARGWCGWSGSSCKVPPPLWTPVEQDRWKTQAWTSFRSQRRDAPSEVM 531 +A GW GS C PP ++ V + + T W++ P + M Sbjct: 510 TANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMKGM 557 >At4g19860.1 68417.m02910 lecithin:cholesterol acyltransferase family protein / LACT family protein similar to lysosomal phospholipase A2 [Mus musculus] GI:18699602; contains Pfam profile PF02450: Lecithin:cholesterol acyltransferase (phosphatidylcholine-sterol acyltransferase) Length = 535 Score = 28.7 bits (61), Expect = 3.8 Identities = 15/51 (29%), Positives = 22/51 (43%) Frame = -2 Query: 356 LLGVEQLTVSAGTNLVDYSWFQINKDSSWHVLSRPVSLKNVLKESSPPPRV 204 L +E T S N DY I+ +W ++ K VL + PP+V Sbjct: 297 LESLEVFTKSLSNNTADYCGESIDLPFNWKIMEWAHKTKQVLASAKLPPKV 347 >At3g03780.2 68416.m00387 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative very strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent Length = 765 Score = 28.7 bits (61), Expect = 3.8 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -2 Query: 674 SARGWCGWSGSSCKVPPPLWTPVEQDRWKTQAWTSFRSQRRDAPSEVM 531 +A GW GS C PP ++ V + + T W+S P + M Sbjct: 510 TANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMTKRPMKGM 557 >At3g03780.1 68416.m00386 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative very strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent Length = 765 Score = 28.7 bits (61), Expect = 3.8 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -2 Query: 674 SARGWCGWSGSSCKVPPPLWTPVEQDRWKTQAWTSFRSQRRDAPSEVM 531 +A GW GS C PP ++ V + + T W+S P + M Sbjct: 510 TANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMTKRPMKGM 557 >At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related similar to ATPase [Homo sapiens] GI:531196; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 1287 Score = 28.7 bits (61), Expect = 3.8 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = +2 Query: 446 DQEAG*PMHRASGFPRVSLVRGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 625 D E+G ++ G R+ R G + L + +D+ + F P VS A Sbjct: 250 DVESGVSESQSDGASRMIFDRHGRVDNGS--LERKPPIDFSSARGISFKFESNPSVSPAC 307 Query: 626 VEPYNS 643 V+PYNS Sbjct: 308 VKPYNS 313 >At5g20980.1 68418.m02494 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative / vitamin-B12-independent methionine synthase, putative / cobalamin-independent methionine synthase, putative strong similarity to SP|O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) {Arabidopsis thaliana}; contains Pfam profile PF01717: Methionine synthase, vitamin-B12 independent Length = 812 Score = 28.3 bits (60), Expect = 5.0 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = -2 Query: 674 SARGWCGWSGSSCKVPPPLWTPVEQDRWKTQAWTSFRSQRRDAPSEVM 531 ++ GW GS C PP ++ + + + T W+S + P + M Sbjct: 558 TSNGWVQSYGSRCVKPPIIYGDITRPKAMTVFWSSMAQKMTQRPMKGM 605 >At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif Length = 669 Score = 28.3 bits (60), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Frame = -2 Query: 638 CKVPPP-LWTPVEQDRWKT 585 C P P W PVEQ +WK+ Sbjct: 59 CNTPKPSAWRPVEQSKWKS 77 >At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif Length = 668 Score = 28.3 bits (60), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Frame = -2 Query: 638 CKVPPP-LWTPVEQDRWKT 585 C P P W PVEQ +WK+ Sbjct: 59 CNTPKPSAWRPVEQSKWKS 77 >At2g35670.1 68415.m04375 transcription factor, putative / fertilization-independent seed 2 protein (FIS2) identical to GB:AF096095 Length = 632 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -1 Query: 561 STERRSIRSDVNPEPVPPRTSETRGNPEALCIGQP--AS*SCPKLR 430 S + +S R +V+ P PP+T ++ + L QP A S PK+R Sbjct: 353 SKKNKSTRKNVDNVPSPPKTRSSKKTSDILTTTQPTIAESSEPKVR 398 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,819,227 Number of Sequences: 28952 Number of extensions: 385966 Number of successful extensions: 1318 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1314 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1447936096 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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