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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1542
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    32   0.49 
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    32   0.49 
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q...    31   0.64 
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    29   4.5  
AL132860-14|CAB60497.1|  619|Caenorhabditis elegans Hypothetical...    29   4.5  
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    29   4.5  
AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z92972-6|CAB07485.1|  153|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +2

Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727
           KGV   +ANK+Y+K+G + ++P     A++ + AD + ++    AA    IN +V
Sbjct: 79  KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +2

Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727
           KGV   +ANK+Y+K+G + ++P     A++ + AD + ++    AA    IN +V
Sbjct: 79  KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131


>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 85
            protein.
          Length = 2203

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = -2

Query: 304  SNSVNSINKTLANIIDKINPLVYYDSSIIFTSTEEN 197
            +N+ N + K +  +++++ PLV + S+I+  S +EN
Sbjct: 1582 TNAENQVTKEMIGMLERVIPLVPFPSNIVLDSIDEN 1617


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 694 SVIEVNFFKICIEYLDSVLLKFWVELIVTLLDVYFV 587
           SV   NFFK+   +  SV    W EL++ LL  Y V
Sbjct: 11  SVSFFNFFKLLFRWRGSVWKSIWSELVLWLLGYYLV 46


>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein
            ZC376.6 protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 267  FARVLLILFTLLEIKNPVLSMD--SKALSSAITKFSAKFCNELDKKK 401
            F R L     ++ I+N + +M+   KA++SAI   +  +C ELD+K+
Sbjct: 883  FVRALNFFSKMVRIENRLKTMEIQHKAMASAIAHKNTLYCLELDRKE 929


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +3

Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500
           T F+ K    L    +VV SPLS    LALI  G      +EL   LG
Sbjct: 9   TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56


>AL132860-14|CAB60497.1|  619|Caenorhabditis elegans Hypothetical
           protein Y56A3A.16 protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 259 DKINPLVYYDSSIIFTST-EENKILSPPVPSKS 164
           D +N L+ ++  +    T EEN +LSP  PS S
Sbjct: 57  DSVNDLISFEEDLNLPGTSEENSLLSPDSPSSS 89


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +3

Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500
           T F+ K    L    +VV SPLS    LALI  G      +EL   LG
Sbjct: 9   TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56


>AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical
           protein Y40C5A.1 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 198 IKFYHHRYHRSRSTYLSQ 145
           + FYH+ YHRS+  YL++
Sbjct: 31  VSFYHNNYHRSKILYLNK 48


>Z92972-6|CAB07485.1|  153|Caenorhabditis elegans Hypothetical
           protein T19C9.6 protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 641 DAVEVFDADFEKVNF--DNGAAAAGLINKWVEIK 736
           D V  FD+   K+N   DNG    G + KWV+ K
Sbjct: 103 DEVFFFDSTGGKINLVADNGLVQFGFVVKWVQCK 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,705
Number of Sequences: 27780
Number of extensions: 306112
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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