Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1542
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 32 0.49
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 32 0.49
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 31 0.64
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 30 1.5
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 29 4.5
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 29 4.5
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 29 4.5
AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 29 4.5
Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727
KGV +ANK+Y+K+G + ++P A++ + AD + ++ AA IN +V
Sbjct: 79 KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727
KGV +ANK+Y+K+G + ++P A++ + AD + ++ AA IN +V
Sbjct: 79 KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = -2
Query: 304 SNSVNSINKTLANIIDKINPLVYYDSSIIFTSTEEN 197
+N+ N + K + +++++ PLV + S+I+ S +EN
Sbjct: 1582 TNAENQVTKEMIGMLERVIPLVPFPSNIVLDSIDEN 1617
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 694 SVIEVNFFKICIEYLDSVLLKFWVELIVTLLDVYFV 587
SV NFFK+ + SV W EL++ LL Y V
Sbjct: 11 SVSFFNFFKLLFRWRGSVWKSIWSELVLWLLGYYLV 46
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein
ZC376.6 protein.
Length = 1152
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 267 FARVLLILFTLLEIKNPVLSMD--SKALSSAITKFSAKFCNELDKKK 401
F R L ++ I+N + +M+ KA++SAI + +C ELD+K+
Sbjct: 883 FVRALNFFSKMVRIENRLKTMEIQHKAMASAIAHKNTLYCLELDRKE 929
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500
T F+ K L +VV SPLS LALI G +EL LG
Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 259 DKINPLVYYDSSIIFTST-EENKILSPPVPSKS 164
D +N L+ ++ + T EEN +LSP PS S
Sbjct: 57 DSVNDLISFEEDLNLPGTSEENSLLSPDSPSSS 89
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500
T F+ K L +VV SPLS LALI G +EL LG
Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical
protein Y40C5A.1 protein.
Length = 242
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 198 IKFYHHRYHRSRSTYLSQ 145
+ FYH+ YHRS+ YL++
Sbjct: 31 VSFYHNNYHRSKILYLNK 48
>Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical
protein T19C9.6 protein.
Length = 153
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 641 DAVEVFDADFEKVNF--DNGAAAAGLINKWVEIK 736
D V FD+ K+N DNG G + KWV+ K
Sbjct: 103 DEVFFFDSTGGKINLVADNGLVQFGFVVKWVQCK 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,705
Number of Sequences: 27780
Number of extensions: 306112
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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