BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1542 (737 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 32 0.49 AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 32 0.49 AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 31 0.64 Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 30 1.5 AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 29 4.5 AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 29 4.5 AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 29 4.5 AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 29 4.5 Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical pr... 28 7.9 >AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cysteine protease inhibitorprotein. Length = 362 Score = 31.9 bits (69), Expect = 0.49 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = +2 Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727 KGV +ANK+Y+K+G + ++P A++ + AD + ++ AA IN +V Sbjct: 79 KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131 >AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3 protein. Length = 362 Score = 31.9 bits (69), Expect = 0.49 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = +2 Query: 563 KGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWV 727 KGV +ANK+Y+K+G + ++P A++ + AD + ++ AA IN +V Sbjct: 79 KGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE-INSFV 131 >AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 85 protein. Length = 2203 Score = 31.5 bits (68), Expect = 0.64 Identities = 11/36 (30%), Positives = 24/36 (66%) Frame = -2 Query: 304 SNSVNSINKTLANIIDKINPLVYYDSSIIFTSTEEN 197 +N+ N + K + +++++ PLV + S+I+ S +EN Sbjct: 1582 TNAENQVTKEMIGMLERVIPLVPFPSNIVLDSIDEN 1617 >Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical protein C37A5.1 protein. Length = 512 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 694 SVIEVNFFKICIEYLDSVLLKFWVELIVTLLDVYFV 587 SV NFFK+ + SV W EL++ LL Y V Sbjct: 11 SVSFFNFFKLLFRWRGSVWKSIWSELVLWLLGYYLV 46 >Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein ZC376.6 protein. Length = 1152 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = +3 Query: 267 FARVLLILFTLLEIKNPVLSMD--SKALSSAITKFSAKFCNELDKKK 401 F R L ++ I+N + +M+ KA++SAI + +C ELD+K+ Sbjct: 883 FVRALNFFSKMVRIENRLKTMEIQHKAMASAIAHKNTLYCLELDRKE 929 >AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cysteine protease inhibitorprotein. Length = 359 Score = 28.7 bits (61), Expect = 4.5 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +3 Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500 T F+ K L +VV SPLS LALI G +EL LG Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56 >AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical protein Y56A3A.16 protein. Length = 619 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 259 DKINPLVYYDSSIIFTST-EENKILSPPVPSKS 164 D +N L+ ++ + T EEN +LSP PS S Sbjct: 57 DSVNDLISFEEDLNLPGTSEENSLLSPDSPSSS 89 >AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein 2 protein. Length = 359 Score = 28.7 bits (61), Expect = 4.5 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +3 Query: 357 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLG 500 T F+ K L +VV SPLS LALI G +EL LG Sbjct: 9 TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56 >AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical protein Y40C5A.1 protein. Length = 242 Score = 28.7 bits (61), Expect = 4.5 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -3 Query: 198 IKFYHHRYHRSRSTYLSQ 145 + FYH+ YHRS+ YL++ Sbjct: 31 VSFYHNNYHRSKILYLNK 48 >Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical protein T19C9.6 protein. Length = 153 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +2 Query: 641 DAVEVFDADFEKVNF--DNGAAAAGLINKWVEIK 736 D V FD+ K+N DNG G + KWV+ K Sbjct: 103 DEVFFFDSTGGKINLVADNGLVQFGFVVKWVQCK 136 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,648,705 Number of Sequences: 27780 Number of extensions: 306112 Number of successful extensions: 839 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 794 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 839 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1735436670 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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