BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1538 (719 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.4 AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 5.8 AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 5.8 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 22.2 bits (45), Expect = 4.4 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -1 Query: 659 GDGNHSPSGGPCARL 615 G GN+ P GGP + + Sbjct: 530 GSGNNQPPGGPSSHV 544 >AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor candidate 59 protein. Length = 489 Score = 21.8 bits (44), Expect = 5.8 Identities = 7/23 (30%), Positives = 15/23 (65%) Frame = +1 Query: 259 LPISAVSSNAFRLLITITTFKIS 327 LP+ + +N +LIT+T +++ Sbjct: 281 LPLLCILTNTLEILITVTVCELT 303 >AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor candidate 25 protein. Length = 314 Score = 21.8 bits (44), Expect = 5.8 Identities = 7/23 (30%), Positives = 15/23 (65%) Frame = +1 Query: 259 LPISAVSSNAFRLLITITTFKIS 327 LP+ + +N +LIT+T +++ Sbjct: 106 LPLLCILTNTLEILITVTVCELT 128 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 147,117 Number of Sequences: 336 Number of extensions: 2787 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 19155320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -