Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1538
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 659 GDGNHSPSGGPCARL 615
           G GN+ P GGP + +
Sbjct: 530 GSGNNQPPGGPSSHV 544


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 259 LPISAVSSNAFRLLITITTFKIS 327
           LP+  + +N   +LIT+T  +++
Sbjct: 281 LPLLCILTNTLEILITVTVCELT 303


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 259 LPISAVSSNAFRLLITITTFKIS 327
           LP+  + +N   +LIT+T  +++
Sbjct: 106 LPLLCILTNTLEILITVTVCELT 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,117
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)