Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1535X
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    27   0.62 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   1.4  
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           23   5.8  
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           23   5.8  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 404 HGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIDMLLKPTG 532
           H  AEG+ E         +E R    L K  +  +D+L KP G
Sbjct: 442 HKDAEGVTESAEDCYDKEKEHRIPYSLPKSTFDRLDLLKKPNG 484


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 315 DLLRSRPSHLLYQ*RNYFLMXTFLRVKLWTMVLLRVLMRE 434
           DLLR  PS      +++  M  F  +K W M  LR++ R+
Sbjct: 345 DLLRKEPSFSAEWAKSFNKMSHFNSLKQWGMNRLRMMNRD 384


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 315 DLLRSRPSHLLYQ*RNYFLMXTFLRVKLWTMVLLRVLMRE 434
           DLLR  PS      +++  M  F  +K W M  LR++ R+
Sbjct: 346 DLLRKEPSFSAEWAKSFNKMSHFNSLKQWGMNRLRMMNRD 385


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 437 QFSHQYPQQDHGP*FDPQESXHQE 366
           Q+ +  PQ+ H     PQ+  HQ+
Sbjct: 4   QYQYAQPQRQHPSLVGPQQQQHQQ 27


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 437 QFSHQYPQQDHGP*FDPQESXHQE 366
           Q+ +  PQ+ H     PQ+  HQ+
Sbjct: 4   QYQYAQPQRQHPSLVGPQQQQHQQ 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,845
Number of Sequences: 2352
Number of extensions: 6906
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)