Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1535X
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047525-1|AAK77257.1|  448|Drosophila melanogaster GH03119p pro...    92   6e-19
AF049912-1|AAC05144.1|  448|Drosophila melanogaster methionine a...    92   6e-19
AE014134-1689|AAF52807.1|  448|Drosophila melanogaster CG4008-PA...    92   6e-19

>AY047525-1|AAK77257.1|  448|Drosophila melanogaster GH03119p
           protein.
          Length = 448

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 41/61 (67%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
 Frame = +2

Query: 329 QTVPPTIPVAELFPDGXFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALDRLHKDIYQE 505
           QT PPTIP+A+L+PDG FPEG+I++H  P +  D+RTAK+RFTSEEKRALDR++ DIYQE
Sbjct: 79  QTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQE 138

Query: 506 I 508
           +
Sbjct: 139 L 139



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +1

Query: 508 RHAAEAHRQTRKHIRNWLKPGMTMIDICEEL 600
           R AAEAHRQTR++++ ++KPGMTMI ICEEL
Sbjct: 140 RQAAEAHRQTRQYMQRYIKPGMTMIQICEEL 170


>AF049912-1|AAC05144.1|  448|Drosophila melanogaster methionine
           aminopeptidase protein.
          Length = 448

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 41/61 (67%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
 Frame = +2

Query: 329 QTVPPTIPVAELFPDGXFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALDRLHKDIYQE 505
           QT PPTIP+A+L+PDG FPEG+I++H  P +  D+RTAK+RFTSEEKRALDR++ DIYQE
Sbjct: 79  QTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQE 138

Query: 506 I 508
           +
Sbjct: 139 L 139



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +1

Query: 508 RHAAEAHRQTRKHIRNWLKPGMTMIDICEEL 600
           R AAEAHRQTR++++ ++KPGMTMI ICEEL
Sbjct: 140 RQAAEAHRQTRQYMQRYIKPGMTMIQICEEL 170


>AE014134-1689|AAF52807.1|  448|Drosophila melanogaster CG4008-PA
           protein.
          Length = 448

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 41/61 (67%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
 Frame = +2

Query: 329 QTVPPTIPVAELFPDGXFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALDRLHKDIYQE 505
           QT PPTIP+A+L+PDG FPEG+I++H  P +  D+RTAK+RFTSEEKRALDR++ DIYQE
Sbjct: 79  QTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQE 138

Query: 506 I 508
           +
Sbjct: 139 L 139



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +1

Query: 508 RHAAEAHRQTRKHIRNWLKPGMTMIDICEEL 600
           R AAEAHRQTR++++ ++KPGMTMI ICEEL
Sbjct: 140 RQAAEAHRQTRQYMQRYIKPGMTMIQICEEL 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,477,896
Number of Sequences: 53049
Number of extensions: 308958
Number of successful extensions: 956
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)