Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1534
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 43  LLPTYNERENLPIIIWLIIKY 105
           ++P + +R  +P+I+W    Y
Sbjct: 138 IVPYFQDRREMPLIVWFPFDY 158


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 162 IRTSIIYYDHFVIDTAFV*IFNY*PYYYREVF 67
           IR ++ Y   FVI+  +V    Y  YY+R+ +
Sbjct: 95  IRKNLYYLLLFVINVLYVLTLCYAVYYWRQQY 126


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 320 PSSKVHSRVHQTPI 361
           PS K+H  +HQT I
Sbjct: 38  PSDKLHHPIHQTVI 51



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 603 RSDNHFHLEDISFRNAA*NKLLENFLFVQSKWPVRSETPGLS 478
           + D H    + SF N   N   E   F +SKW    E+PG +
Sbjct: 88  KHDRHERHFESSFGN---NLHSEKAKFNESKWQDSGESPGFT 126


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 548 ISFSRTSFLYNLNGQSDLKLQV 483
           +S    +FLY +NGQ    +++
Sbjct: 257 VSALNGAFLYTINGQGQFNIEM 278


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 614 SNCRALIIISIW 579
           + C A+III+IW
Sbjct: 202 ATCYAIIIITIW 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,671
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)