Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1534
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3120|AAF53817.1|  241|Drosophila melanogaster CG10166-P...   128   5e-30
AY094692-1|AAM11045.1|  326|Drosophila melanogaster GH09240p pro...    47   2e-05
AE014134-1452|AAF52633.1|  326|Drosophila melanogaster CG7870-PA...    47   2e-05
AY113284-1|AAM29289.1|  124|Drosophila melanogaster AT18611p pro...    29   8.1  
AE013599-3024|AAM68387.1|  124|Drosophila melanogaster CG30148-P...    29   8.1  

>AE014134-3120|AAF53817.1|  241|Drosophila melanogaster CG10166-PA
           protein.
          Length = 241

 Score =  128 bits (310), Expect = 5e-30
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +1

Query: 31  KYSILLPTYNERENLPIIIWLIIKYLDESGVDYEVIIIDDGSPDGTSEVARQLQKLYGSS 210
           KYSIL+PTYNE++NLPIIIWLI+KY+  SG++YEVI+IDDGSPDGT +VA+ LQK+YG  
Sbjct: 7   KYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIYGED 66

Query: 211 KIVLRPREMKLGLGTPTFMG 270
           KIVLRPR  KLGLGT    G
Sbjct: 67  KIVLRPRGSKLGLGTAYIHG 86



 Score =  115 bits (276), Expect = 7e-26
 Identities = 49/62 (79%), Positives = 58/62 (93%)
 Frame = +3

Query: 255 AYIHGIQQASGNFIIIMDADLSHHPKFIPEFIKLQLKYDYDIVSGTRYKGSGGVYGWDFK 434
           AYIHGI+ A+G+FI+I+DADLSHHPKFIPEFIKLQ + +YDIVSGTRY G+GGV+GWDFK
Sbjct: 82  AYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFK 141

Query: 435 RK 440
           RK
Sbjct: 142 RK 143



 Score =  109 bits (263), Expect = 3e-24
 Identities = 49/63 (77%), Positives = 57/63 (90%)
 Frame = +1

Query: 511 FRLYKKEVLEKLILSCVSKGYVFQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEI 690
           FRLYKK+VLEK I SCVSKGYVFQMEM++RARQ  Y+I EVPI+FVDR+YG SKLGG+EI
Sbjct: 168 FRLYKKDVLEKCIASCVSKGYVFQMEMLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEI 227

Query: 691 VQF 699
           +QF
Sbjct: 228 IQF 230



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 440 VISRGANFLTQLMLRPGVSDLTGHLDCTKR 529
           +ISRGANFL+Q++LRP  SDLTG     K+
Sbjct: 144 LISRGANFLSQVLLRPNASDLTGSFRLYKK 173


>AY094692-1|AAM11045.1|  326|Drosophila melanogaster GH09240p
           protein.
          Length = 326

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = +1

Query: 37  SILLPTYNERENLPIIIWLIIKYLDESGVD-----YEVIIIDDGSPDGTSEVARQLQKLY 201
           S+++P YNE + LP ++   + +L++         YEVI++ DGS D T  VA    K +
Sbjct: 69  SVIVPAYNEEQRLPSMLDECLAFLEQKSAGTPNFTYEVIVVSDGSQDATVSVALGYSKKH 128

Query: 202 GSSKIVLRPREMKLGLGTPTFMG 270
           G+ K+ +       G G    MG
Sbjct: 129 GAEKVRVLELIENRGKGGAVRMG 151


>AE014134-1452|AAF52633.1|  326|Drosophila melanogaster CG7870-PA
           protein.
          Length = 326

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = +1

Query: 37  SILLPTYNERENLPIIIWLIIKYLDESGVD-----YEVIIIDDGSPDGTSEVARQLQKLY 201
           S+++P YNE + LP ++   + +L++         YEVI++ DGS D T  VA    K +
Sbjct: 69  SVIVPAYNEEQRLPSMLDECLAFLEQKSAGTPNFTYEVIVVSDGSQDATVSVALGYSKKH 128

Query: 202 GSSKIVLRPREMKLGLGTPTFMG 270
           G+ K+ +       G G    MG
Sbjct: 129 GAEKVRVLELIENRGKGGAVRMG 151


>AY113284-1|AAM29289.1|  124|Drosophila melanogaster AT18611p
           protein.
          Length = 124

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 254 RLHSWDTASFWKFYYYNGCGFEPSSKVH 337
           +L+  DT  FW +  YNG G+      H
Sbjct: 87  KLNHGDTLYFWTYVIYNGLGYRQDEGAH 114


>AE013599-3024|AAM68387.1|  124|Drosophila melanogaster CG30148-PA
           protein.
          Length = 124

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 254 RLHSWDTASFWKFYYYNGCGFEPSSKVH 337
           +L+  DT  FW +  YNG G+      H
Sbjct: 87  KLNHGDTLYFWTYVIYNGLGYRQDEGAH 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,101,418
Number of Sequences: 53049
Number of extensions: 589964
Number of successful extensions: 1446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)