Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1533
(794 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 37 0.003
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.009
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 35 0.015
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 34 0.027
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 33 0.047
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 32 0.11
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 31 0.14
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 31 0.19
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 30 0.44
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.58
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 29 0.77
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 28 1.8
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 4.1
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 4.1
SPAC1783.04c |hst4||Sir2 family histone deacetylase Hst4|Schizos... 27 4.1
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 26 5.4
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 26 5.4
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 26 7.1
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 26 7.1
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 7.1
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 25 9.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.4
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 104 IHERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICKSKFTRK 256
I + ++ C +C K F R ++TRH CH + + PC C+ K RK
Sbjct: 25 IDSKRVFPCDQCAKRFTRHENLTRH---KACHSKAEPI-PCPYCEIKCKRK 71
Score = 29.1 bits (62), Expect = 0.77
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 38 VACTKCKVRCPNETVLKEHIETIH 109
+ C C+++C + +LK HI+ H
Sbjct: 59 IPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 122 YVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICKSKFTRK 256
+VCPEC+K+F R H+ RH+ H + + C IC +F+R+
Sbjct: 423 FVCPECSKKFKRSEHLRRHI--RSLHTSE-KPFVC-ICGKRFSRR 463
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 34.7 bits (76), Expect = 0.015
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HIEMNHSTLPNSVACTKCKVRCPNETVLKEHIETIHERAL-YVCPECNKEFVRRSHVTRH 178
HI+ + S P C CK LK H+ IHE YVC EC K F R + RH
Sbjct: 463 HIQTHLSDRP--YRCDLCKAGFVRHHDLKRHLR-IHENGRPYVC-ECLKRFNRLDALNRH 518
Query: 179 MTQSGCHG 202
++ C G
Sbjct: 519 KQRNICVG 526
Score = 29.9 bits (64), Expect = 0.44
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 53 CKVRCPNETVLKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEI 232
C R + ++ HI+T Y C C FVR + RH+ + +GR Y CE
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL-RIHENGRP---YVCE- 504
Query: 233 CKSKFTR 253
C +F R
Sbjct: 505 CLKRFNR 511
Score = 29.9 bits (64), Expect = 0.44
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 692 HILTHVTDKPHKCKHCNRSYIQ 757
HI TH++D+P++C C +++
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVR 484
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 211 KFVSL*N-LQVKIHKEDNLIVHLRTQHIHKSEKYFFCKSCTFETKNFSRLVNHWHLKHSG 387
K+V L N +I ++ N+ H++T H S++ + C C L H + +G
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQT---HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 388 TPNYYEC 408
P EC
Sbjct: 499 RPYVCEC 505
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 33.9 bits (74), Expect = 0.027
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 53 CKVRCPNETVLKEHIETIHE-RALYVCPECNKEFVRRSHVTRHMTQSGC 196
CK + LK+HI IHE + C C +F + + RH+ + C
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTC 291
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 50 KCKVRCPNETVLKEHIETIHERALYVCPE--CNKEFVRRSHVTRH 178
+C + ++L++H+ T +VC C+K F R+SH+ H
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Score = 25.8 bits (54), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 271 HLRTQHIHKSEKYFFCKSCTFETKNFSRLVNHWHLKHSGTPNYYECYHCG-----KSTSS 435
H+R H+ C C + K + L +H L H T + YHC KS +
Sbjct: 197 HIREAHVPS------CSICGRQFKTAAHLRHHVVL-HQTTLEERKTYHCPMEGCKKSFTR 249
Query: 436 RAAMAKHLEIHGEKN 480
+A+ KH+ + E N
Sbjct: 250 SSALKKHISVIHEGN 264
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 653 CGYATYTVEVMRRHILTHVTDKPHKC 730
C YT + + RHI H KP+ C
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYAC 115
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 33.1 bits (72), Expect = 0.047
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 650 MCGYATYTVEVMRRHILTHVTDKPHKC 730
+C A Y +E RHI TH +KPH C
Sbjct: 30 LCTKAFYRLEHQTRHIRTHTGEKPHVC 56
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 122 YVCPECNKEFVRRSHVTRHM-TQSG 193
Y CP C K F R H TRH+ T +G
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTG 50
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 44 CTKCKVRCPNETVLKEHIETIHERALYVC--PECNKEFVRRSHVTRH 178
CTK R ++T HI T +VC P C K F R +TRH
Sbjct: 31 CTKAFYRLEHQT---RHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KHSGTPNYYECYHCGKSTSSRAAMAKHLEIH-GEKNYTC 489
K+ P Y+C C K+ +H+ H GEK + C
Sbjct: 18 KNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC 56
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 65 CPNETVLKEHI---ETIHERA-LYVCPECNKEFVRRSHVTRHMTQ 187
CP KEH+ E HE + C CN+ F R + RH+ Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQ 77
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 131 PECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICKSKFTR 253
P+C K F R+ H+ RH H + + C C F R
Sbjct: 31 PDCPKSFTRKEHLRRH---ERTH-ENVKAFSCSFCNRAFAR 67
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 677 EVMRRHILTHVTDKPHKCKHCNRSY 751
E +RRH TH K C CNR++
Sbjct: 41 EHLRRHERTHENVKAFSCSFCNRAF 65
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 122 YVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICKSKFTRK 256
Y CP C + F R+ H RH+ YP CK +FTR+
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPS--CKKRFTRR 46
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +2
Query: 35 SVACTKCKVRCPNETVLKEHIETIHERALYVC--PECNKEFVRRSHVTRHM 181
S C CK + HI + + C P C K F RR + RH+
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 31.1 bits (67), Expect = 0.19
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +2
Query: 8 EMNHSTLPNSVACTKCKVRCPNETVLKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQ 187
E+ S P S C C++ P V T R Y CP C F V H
Sbjct: 353 EIPWSANPKSTHCFACQLPFPKPPVSPFDESTSSMR--YACPSCKNHFCLDCDVFAHEQL 410
Query: 188 SGCHGRQ 208
C+G Q
Sbjct: 411 HECYGCQ 417
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.44
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 113 RALYVCPECNKEFVRRSHVTRHMTQSGCHGRQL 211
++ +C C ++F HV +H+TQS H L
Sbjct: 401 KSALICVLCERKFQSWGHVVKHITQSIMHNNNL 433
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 44 CTKCKVRCPNETVLKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQ 187
CTK R + + H + ++CP C+ F R + RH+ Q
Sbjct: 24 CTKSFTRKEHA---RRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 677 EVMRRHILTHVTDKPHKCKHCNRSY 751
E RRH +H K C HC+ S+
Sbjct: 32 EHARRHFRSHTNSKAFICPHCSSSF 56
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 29.1 bits (62), Expect = 0.77
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +2
Query: 122 YVCP--ECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICKSKFTRK 256
YVC CNK F R ++ HM + C ICK F R+
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTH----TNYRPFQCSICKKSFARQ 612
Score = 29.1 bits (62), Expect = 0.77
Identities = 18/67 (26%), Positives = 24/67 (35%)
Frame = +2
Query: 53 CKVRCPNETVLKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEI 232
C R LK H+ T + C C K F R+ RH H + + C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH---EQLH-TGIKAFACVT 632
Query: 233 CKSKFTR 253
C +F R
Sbjct: 633 CNQRFAR 639
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 MNHSTLPNSVACTKCKVRCPNETVLKEHIETIHERA-LYVCPECNKEFVRRSHVTRH 178
MN T C+ CK + + H E +H + C CN+ F R + RH
Sbjct: 591 MNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +2
Query: 683 MRRHILTHVTDKPHKCKHCNRSYIQK 760
++ H+ TH +P +C C +S+ ++
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQ 612
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 122 YVCPECNKEFVRRSHVTRHM 181
YVC C + F R H+ RH+
Sbjct: 70 YVCETCTRAFARLEHLKRHI 89
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 653 CGYATYTVEVMRRHILTHVTDKPHKC 730
C A +E ++RHI +H +KP C
Sbjct: 75 CTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 229 NLQVKIHKEDNLIVHLRTQHIHKSEKY 309
NLQ +IH+ D+LI L+ Q + KY
Sbjct: 455 NLQEQIHQNDDLIESLKNQILTWKNKY 481
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 316 CKSCTFETKNFSRLVNHWHLKHSGTPNYYECYHCGKSTSSRAAMAKHLEIHG 471
C C S L H + P + CGK+ + R+ M +H IHG
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIHG 521
>SPAC1783.04c |hst4||Sir2 family histone deacetylase
Hst4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 17 HSTLPNSVACTKCKVRCPNETVLKEHIETIHER-ALYVCPECNKEFVRRSHVTRHMTQSG 193
H TL V+CT+C + LK+ I +R + VCP+C E R + G
Sbjct: 184 HGTL-EVVSCTRC-------SFLKKFNPDIFDRNGVTVCPDCKTENEVRRIAGKRSVIEG 235
Query: 194 CHGRQLNLY 220
C ++ LY
Sbjct: 236 CLRPRIVLY 244
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 98 ETIHERALYVCPECNKEFVR 157
E I E YVCP+ KEF R
Sbjct: 238 ERIKEECCYVCPDIVKEFSR 257
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +1
Query: 295 KSEKYFFCKSCT-FETKNFSRLVNHWHLKHSGTPNYYECYHCGKSTSS 435
K KY CKS +++ + W L N+YE H S
Sbjct: 124 KGNKYPQCKSKNLYDSLKLEECIESWSLNQKQNENFYEHTHLNSRDDS 171
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 23 TLPNSVACTKCKVRCPNETVLKEHIETIHERALYVCPECNKEFV 154
TL +A C+ C ++ +E I+T + + CP C+++ V
Sbjct: 283 TLCKKLARNACRTPCCDKLFCEECIQTALLDSDFECPNCHRKDV 326
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 229 NLQVKIHKEDNLIVHLRTQHIHKSEKYFFCKSCTFETKNFSRLVNHWHL 375
NL + D+ I HLR ++ + YFF S F KN + N ++L
Sbjct: 674 NLPINYFGLDHFI-HLRVWYVLLHKIYFFIASAYFSLKN-EKFENEFYL 720
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 122 YVCPECNKEFVRRSHVTRHMTQSG 193
+ C CN+EF V HM Q G
Sbjct: 259 FTCLTCNREFKSLEAVRAHMQQKG 282
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +2
Query: 8 EMNHSTLPNSVACTKCKVRCPNETVLKEHIETIH 109
+ + S + + C C + PN + L +H++ H
Sbjct: 29 QSDSSNIVKATECPICGLELPNLSALNDHLDVTH 62
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 367 WHLKHSGTPNYYECYH 414
W KH G +Y+ C H
Sbjct: 3074 WEFKHLGKTSYFSCLH 3089
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,270,651
Number of Sequences: 5004
Number of extensions: 67629
Number of successful extensions: 210
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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