Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1532
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.22 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -3

Query: 314 FFLVKIFFSNFKLLMTLSCKLLKCRFNQRTLPLSICCTYIRLNNKILFIFITLSALLH 141
           F+   I F+   LL  L      C F   T+ L  CC +I  N  +LF+       LH
Sbjct: 149 FYCAFIIFT-VHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLH 205



 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 278 LLMTLSCKLLKCRFNQRTLPLSICCTYIRLNNKILFI 168
           +L T+   LL C +    + L  CC +I     +LF+
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFL 282


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 249 KMSL*PKNPSPVYMLY 202
           KM L PK P P+ +LY
Sbjct: 44  KMPLLPKTPLPLTLLY 59


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 641 NNVLRLCRTHYWLQKVSRHI 700
           +N+  LCR HY L  V + I
Sbjct: 228 DNLYILCRLHYKLTSVMQKI 247


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 641 NNVLRLCRTHYWLQKVSRHI 700
           +N+  LCR HY L  V + I
Sbjct: 228 DNLYILCRLHYKLTSVMQKI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,631
Number of Sequences: 336
Number of extensions: 4233
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)