Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1532
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052088-1|AAK93512.1|  491|Drosophila melanogaster SD03973p pro...    30   4.1  
AE013599-2016|AAF58166.1|  491|Drosophila melanogaster CG11807-P...    30   4.1  

>AY052088-1|AAK93512.1|  491|Drosophila melanogaster SD03973p
           protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +1

Query: 220 GRVLWLK----RHFSNLQERVIKSLKFEKNILTKKKLV 321
           G+V WL     R F+NL E+++  +   K +L  KKLV
Sbjct: 37  GKVEWLVERRYRDFANLHEKLVGEISISKKLLPPKKLV 74


>AE013599-2016|AAF58166.1|  491|Drosophila melanogaster CG11807-PA
           protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +1

Query: 220 GRVLWLK----RHFSNLQERVIKSLKFEKNILTKKKLV 321
           G+V WL     R F+NL E+++  +   K +L  KKLV
Sbjct: 37  GKVEWLVERRYRDFANLHEKLVGEISISKKLLPPKKLV 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,083,670
Number of Sequences: 53049
Number of extensions: 609665
Number of successful extensions: 969
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)