Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1529X
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.60 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.60 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   0.79 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   1.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   1.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   2.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   2.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   2.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   2.4  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   2.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   7.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   7.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   9.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  TYPTAGGGPREVRGASR 73
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  TYPTAGGGPREVRGASR 73
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +3

Query: 105 QAADESERIRKALENRTNMEDDRVAILEAQLSQA 206
           QA   +  +++A+  + +  D+R+A ++AQL  A
Sbjct: 54  QAPKLNAEVKRAITQQHSERDERLAHVQAQLGAA 87


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 186 PRWQRDHPPCWCGSPAPCVFARIHRR 109
           PR ++ HPP W      C+  R  RR
Sbjct: 46  PRQKKSHPPQWTWQ---CINQRCERR 68


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 228 PTPRRWTSPVTVEPPRWQRDHPPCWCGSP 142
           P+PRR   PV V      RD  PC  G P
Sbjct: 114 PSPRRVAVPVLV------RDGKPCLSGGP 136


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 189 AQLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSPVNPK 320
           A+L+Q + I  +  +KYE+    +    +     +S   P+ PK
Sbjct: 149 AKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPK 192


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 2   RSGCPEPTYPTAGGGPREVRGASR 73
           R GC   +  T  GGPR  R A++
Sbjct: 54  RWGCARASSATTMGGPRYGRAAAQ 77


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 299 HAPRRAPSQPQPW 261
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 299 HAPRRAPSQPQPW 261
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 299 HAPRRAPSQPQPW 261
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 299 HAPRRAPSQPQPW 261
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 299 HAPRRAPSQPQPW 261
           H   +AP  PQPW
Sbjct: 13  HLRFKAPQAPQPW 25


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  YPTAGGGPREVRGASRDRHRQAVRGQ 103
           YP  G    E+RG SR ++ + V  Q
Sbjct: 445 YPLIGAMREELRGISRGKNAKDVDWQ 470


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 250 ATSSYFLSDSSAMDFACDS*ASKMATRSSSMLVRF 146
           +TS+Y  + SS +D    S  S     SSS+   +
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 250 ATSSYFLSDSSAMDFACDS*ASKMATRSSSMLVRF 146
           +TS+Y  + SS +D    S  S     SSS+   +
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 246 VARSWPWLRLTWS 284
           +A+SWP L   WS
Sbjct: 281 LAKSWPQLIEKWS 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,464
Number of Sequences: 336
Number of extensions: 1255
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)