Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1529X
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   1.3  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   3.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   5.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   5.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   6.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   6.7  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    22   8.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   8.9  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 383 LRLPEISGCYQRHGAPPQAQRFWIHRTRHA 294
           L + E + C+QR+ A P+A R  I R   A
Sbjct: 845 LLIKEDARCHQRYLADPEASRAVIRREERA 874


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 153 CGSPAPCVFARIHRRPGW 100
           CGS  P ++ ++H    W
Sbjct: 356 CGSSTPAIYTKVHPYLDW 373


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 2   RSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
           R G P P  P    GP+  +G       +  RGQ G
Sbjct: 409 RPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMG 444



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 77  RHRQAVRGQPGRR*IRANTQGAGEPHQHG 163
           RH Q V+G+PG   ++ N   +G+    G
Sbjct: 725 RHGQTVKGEPG---LKGNVGYSGDKGDKG 750


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 98  GQPGRR*IRANTQGAGEPHQH 160
           G+P RR  R+   G  +PH +
Sbjct: 112 GEPSRRWTRSGATGRRQPHPY 132


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 98  GQPGRR*IRANTQGAGEPHQH 160
           G+P RR  R+   G  +PH +
Sbjct: 112 GEPSRRWTRSGATGRRQPHPY 132


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
 Frame = -1

Query: 147 SPAPCVFARIHRRPGWPRTAWRWRSRD----APRTS----RGPPPAVGYVGSG 13
           SP P ++   H     P+++  W S +     P+TS     GP P  G  GSG
Sbjct: 48  SPQPAMYYP-HPHVFHPQSSPDWSSHENFSTPPQTSLGLSHGPSPGAGGTGSG 99


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 125 ANTQGAGEPHQHGG*SRCHLGGSTV--TGEVHRR 220
           ++ +G   PH +    R H+G STV   GE  R+
Sbjct: 250 SSKKGGPPPHIYPWMKRVHIGQSTVNANGETKRQ 283


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 134 QGAGEPHQHGG 166
           +GAG  H HGG
Sbjct: 214 EGAGSGHNHGG 224


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 29  PTAGGGPREVRGASRDRHRQAVRGQPG 109
           P+   GP   +G   DR    + G+PG
Sbjct: 583 PSGPSGPLGPQGEKGDRGDSGLMGRPG 609


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,054
Number of Sequences: 2352
Number of extensions: 5926
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)