Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1529X
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 86 4e-17
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 86 4e-17
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 86 4e-17
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 86 4e-17
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 86 4e-17
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 86 4e-17
AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplasti... 86 4e-17
AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion oncopro... 86 4e-17
X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mR... 85 1e-16
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 85 1e-16
X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of t... 85 1e-16
BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 85 1e-16
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 85 1e-16
BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform pro... 85 1e-16
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 85 1e-16
AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein. 85 1e-16
AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 85 1e-16
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 85 1e-16
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 84 2e-16
M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein. 84 2e-16
M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein. 84 2e-16
M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblas... 84 2e-16
BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 84 2e-16
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 84 2e-16
AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta) pr... 84 2e-16
AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 84 2e-16
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 84 2e-16
AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein. 84 2e-16
Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein. 82 5e-16
M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein. 82 5e-16
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 82 5e-16
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 82 5e-16
M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyos... 82 5e-16
DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha var... 82 5e-16
BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha) p... 82 5e-16
BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein. 82 5e-16
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 82 5e-16
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 82 5e-16
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 82 5e-16
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 82 5e-16
AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein. 82 5e-16
DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein. 82 7e-16
AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta) is... 82 7e-16
X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA) prot... 81 2e-15
AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant pr... 79 4e-15
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 77 3e-14
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 77 3e-14
AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein. 73 4e-13
AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein. 54 1e-07
AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion oncopro... 50 2e-06
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 49 4e-06
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 49 4e-06
AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein. 49 4e-06
AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens ... 48 1e-05
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 35 0.10
AK124171-1|BAC85794.1| 534|Homo sapiens protein ( Homo sapiens ... 34 0.14
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 33 0.24
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 33 0.31
X14723-1|CAA32847.1| 449|Homo sapiens protein ( Human SP-40,40 ... 33 0.42
M74816-1|AAA60321.1| 389|Homo sapiens sulfated glycoprotein-2 p... 33 0.42
M64722-1|AAB06508.1| 449|Homo sapiens TRPM-2 protein. 33 0.42
M63379-1|AAB06507.1| 449|Homo sapiens TRPM-2 protein. 33 0.42
M25915-1|AAA35692.1| 448|Homo sapiens protein ( Human complemen... 33 0.42
L00974-1|AAA60567.1| 310|Homo sapiens 'SP40,40' protein. 33 0.42
J02908-1|AAA51765.1| 416|Homo sapiens APOJ protein. 33 0.42
BC019588-1|AAH19588.1| 449|Homo sapiens CLU protein protein. 33 0.42
BC010514-1|AAH10514.1| 449|Homo sapiens CLU protein protein. 33 0.42
AY513288-1|AAT08041.1| 449|Homo sapiens aging-associated protei... 33 0.42
AY341244-1|AAP88927.1| 447|Homo sapiens clusterin (complement l... 33 0.42
AK090445-1|BAC03426.1| 282|Homo sapiens FLJ00366 protein protein. 32 0.73
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 31 0.96
AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplasti... 31 1.3
M26072-1|AAA51555.1| 187|Homo sapiens PLI protein. 31 1.7
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 31 1.7
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein. 31 1.7
BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein. 31 1.7
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM... 31 1.7
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 31 1.7
BC042172-1|AAH42172.1| 184|Homo sapiens ZMYM6 protein protein. 30 2.2
AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein. 30 2.9
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 30 2.9
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 30 2.9
AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein. 30 2.9
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 30 2.9
AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein. 30 2.9
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 30 2.9
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 30 2.9
AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein. 30 2.9
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 30 2.9
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 30 2.9
AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein. 30 2.9
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 30 2.9
AK096713-1|BAC04848.1| 990|Homo sapiens protein ( Homo sapiens ... 30 2.9
AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens ... 30 2.9
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 30 2.9
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 29 3.9
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 29 3.9
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 29 3.9
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 29 3.9
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 29 3.9
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 29 3.9
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 29 3.9
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 29 3.9
AL662844-15|CAM25639.1| 871|Homo sapiens coiled-coil alpha-heli... 29 3.9
AL662844-14|CAM25638.1| 216|Homo sapiens coiled-coil alpha-heli... 29 3.9
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 29 3.9
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 29 3.9
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 29 3.9
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 29 3.9
AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein. 29 3.9
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 29 3.9
L29385-1|AAA59205.1| 2270|Homo sapiens voltage-dependent calcium... 29 5.1
L29384-1|AAA59204.1| 2251|Homo sapiens voltage-dependent calcium... 29 5.1
L27745-1|AAA72125.1| 2312|Homo sapiens voltage-operated calcium ... 29 5.1
BC100976-1|AAI00977.1| 416|Homo sapiens RHBDL3 protein protein. 29 5.1
BC035621-1|AAH35621.1| 893|Homo sapiens chromosome 12 open read... 29 5.1
BC026101-1|AAH26101.1| 345|Homo sapiens nudE nuclear distributi... 29 5.1
AY004871-1|AAF97497.1| 345|Homo sapiens Nudel protein. 29 5.1
AL590998-3|CAI22329.1| 2313|Homo sapiens calcium channel, voltag... 29 5.1
AL590998-2|CAI22328.1| 2251|Homo sapiens calcium channel, voltag... 29 5.1
AL590998-1|CAI22327.1| 2270|Homo sapiens calcium channel, voltag... 29 5.1
AL359270-3|CAI14655.1| 2313|Homo sapiens calcium channel, voltag... 29 5.1
AL359270-2|CAI14654.1| 2251|Homo sapiens calcium channel, voltag... 29 5.1
AL359270-1|CAI14653.1| 2270|Homo sapiens calcium channel, voltag... 29 5.1
AL161734-3|CAH72676.1| 2313|Homo sapiens calcium channel, voltag... 29 5.1
AL161734-2|CAH72677.1| 2251|Homo sapiens calcium channel, voltag... 29 5.1
AL161734-1|CAH72675.1| 2270|Homo sapiens calcium channel, voltag... 29 5.1
AL160059-3|CAI17082.1| 2313|Homo sapiens calcium channel, voltag... 29 5.1
AL160059-2|CAI17081.1| 2251|Homo sapiens calcium channel, voltag... 29 5.1
AL160059-1|CAI17083.1| 2270|Homo sapiens calcium channel, voltag... 29 5.1
AL109964-5|CAI42207.1| 132|Homo sapiens chromosome 20 open read... 29 5.1
AK128697-1|BAC87576.1| 211|Homo sapiens protein ( Homo sapiens ... 29 5.1
AF223391-2|AAF37688.1| 2162|Homo sapiens calcium channel alpha1E... 29 5.1
AF223391-1|AAF37687.1| 2224|Homo sapiens calcium channel alpha1E... 29 5.1
AF217798-1|AAF24516.3| 345|Homo sapiens endooligopeptidase A pr... 29 5.1
AF182078-1|AAG43425.1| 345|Homo sapiens mitosin-associated prot... 29 5.1
AB209499-1|BAD92736.1| 1869|Homo sapiens calcium channel, voltag... 29 5.1
X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein. 29 6.8
DQ227317-1|ABB51162.1| 603|Homo sapiens synphilin-1A protein. 29 6.8
BC094759-1|AAH94759.1| 603|Homo sapiens SNCAIP protein protein. 29 6.8
BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein. 29 6.8
BC040552-1|AAH40552.1| 1016|Homo sapiens SNCAIP protein protein. 29 6.8
BC033743-1|AAH33743.1| 553|Homo sapiens SNCAIP protein protein. 29 6.8
AY898961-1|AAX84028.1| 540|Homo sapiens type XXIII collagen pro... 29 6.8
AY172563-1|AAN87347.1| 76|Homo sapiens apolipoprotein J protein. 29 6.8
AY158895-1|AAO18361.1| 540|Homo sapiens alpha 1 type XXIII coll... 29 6.8
AL137461-1|CAB70749.1| 201|Homo sapiens hypothetical protein pr... 29 6.8
AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens ... 29 6.8
AF167306-1|AAG17478.1| 919|Homo sapiens synuclein alpha interac... 29 6.8
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein. 29 6.8
AF076929-1|AAD30362.1| 919|Homo sapiens synphilin 1 protein. 29 6.8
AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform... 29 6.8
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform... 29 6.8
AB110789-1|BAD19018.1| 859|Homo sapiens synphilin-1b protein pr... 29 6.8
AB110788-1|BAD19017.1| 919|Homo sapiens synphilin-1a protein pr... 29 6.8
X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for ... 28 8.9
X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for ... 28 8.9
M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A m... 28 8.9
M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C m... 28 8.9
BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open read... 28 8.9
BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein. 28 8.9
BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein. 28 8.9
BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein. 28 8.9
BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for IM... 28 8.9
BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein. 28 8.9
BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein. 28 8.9
AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript va... 28 8.9
AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript va... 28 8.9
AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript va... 28 8.9
AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antige... 28 8.9
AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein. 28 8.9
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 28 8.9
AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein. 28 8.9
AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein. 28 8.9
AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein. 28 8.9
AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein. 28 8.9
AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein. 28 8.9
AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein. 28 8.9
AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein. 28 8.9
AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein. 28 8.9
AK001617-1|BAA91791.1| 597|Homo sapiens protein ( Homo sapiens ... 28 8.9
AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced bl... 28 8.9
AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth facto... 28 8.9
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 28 8.9
AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein. 28 8.9
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 84 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEEADRKYEEVAR 167
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 169 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 210
>AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein protein.
Length = 320
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion
oncoprotein type 2 protein.
Length = 237
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VAALNRRIQ ATA KL EA +AADESER K +ENR +++++ I
Sbjct: 48 DVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEMQLKEAKHIAEEADRKYEEVAR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 174
>X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mRNA
for cytoskeletal tropomyosin TM30(nm). ).
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 85 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 144
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 145 QEIQLKEAKHIAEEADRKYEEVAR 168
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 209
>X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of trk
oncogene. ).
Length = 641
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLEEAKHIAEEADRKYEEVAR 131
>BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 85 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 144
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 145 QEIQLKEAKHIAEEADRKYEEVAR 168
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 209
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 85 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 144
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 145 QEIQLKEAKHIAEEADRKYEEVAR 168
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 209
>BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform
protein.
Length = 247
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEEADRKYEEVAR 167
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 169 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 208
>AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein.
Length = 247
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 133 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 172
>AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 133 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 172
>AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 84.6 bits (200), Expect = 1e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEEADRKYEEVAR 131
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E +L K +LEEEL++V NNLKSLE
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLE 208
>M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblast
muscle-type tropomyosin mRNA, complete cds. ).
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E +L K +LEEEL++V NNLKSLE
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLE 208
>AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 322
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E +L K +LEEEL++V NNLKSLE
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLE 208
>AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E +L K +LEEEL++V NNLKSLE
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLE 208
>AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein.
Length = 257
Score = 83.8 bits (198), Expect = 2e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein.
Length = 243
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 47 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 106
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 107 QEIQLKEAKHIAEDADRKYEEVAR 130
>M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein.
Length = 229
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 29 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 88
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 89 QEIQLKEAKHIAEDADRKYEEVAR 112
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 64 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 123
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 124 QEIQLKEAKHIAEDADRKYEEVAR 147
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 149 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 188
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVAR 167
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 208
>M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyosin
mRNA, complete cds. ).
Length = 284
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVAR 167
>DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha
variant 6 protein.
Length = 245
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 48 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEDADRKYEEVAR 131
>BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 245
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 48 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 107
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 108 QEIQLKEAKHIAEDADRKYEEVAR 131
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 133 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 172
>BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein.
Length = 287
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 90 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 149
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 150 QEIQLKEAKHIAEDADRKYEEVAR 173
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 175 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 214
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVAR 167
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVAR 167
Score = 35.1 bits (77), Expect = 0.078
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V N+LKSLE
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNDLKSLE 208
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVAR 167
Score = 35.1 bits (77), Expect = 0.078
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V N+LKSLE
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNDLKSLE 208
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 126 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 185
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 186 QEIQLKEAKHIAEDADRKYEEVAR 209
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 211 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 250
>AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein.
Length = 203
Score = 82.2 bits (194), Expect = 5e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AADESER K +E+R +++++ I
Sbjct: 15 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 74
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 75 QEIQLKEAKHIAEDADRKYEEVAR 98
>DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein.
Length = 247
Score = 81.8 bits (193), Expect = 7e-16
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AA ESER K +ENR +++++ +
Sbjct: 47 EVASLNRRIQLVEEELDRPQERLATALQKLEEAEKAAGESERGMKVIENRALKDEEKMEL 106
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 107 QELQLKEAKHIAEEADRKYEEVAR 130
>AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta)
isoform 2 variant protein.
Length = 284
Score = 81.8 bits (193), Expect = 7e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+L+RRIQ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 84 DVASLSRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEL 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE+SD+KYEEVAR
Sbjct: 144 QEMQLKEAKHIAEDSDRKYEEVAR 167
>X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA)
protein.
Length = 227
Score = 80.6 bits (190), Expect = 2e-15
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ AT KL EA +AADESER K +E+R +++++ I
Sbjct: 27 DVASLNRRIQLVEEELDRAQERLATVLQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 86
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 87 QEIQLKEAKHIAEDADRKYEEVAR 110
>AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant
protein.
Length = 303
Score = 79.4 bits (187), Expect = 4e-15
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA +AAD SER K +E+R +++++ I
Sbjct: 106 DVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADGSERGMKVIESRAQKDEEKMEI 165
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAE++D+KYEEVAR
Sbjct: 166 QEIQLKEAKHIAEDADRKYEEVAR 189
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E+DL K ELEEEL+ V NNLKSLE
Sbjct: 191 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 230
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 76.6 bits (180), Expect = 3e-14
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
E+AA+ ++++ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 42 ELAAMQKKLKGTEDELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 101
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 102 QEIQLKEAKHIAEEADRKYEEVAR 125
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 127 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 166
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 76.6 bits (180), Expect = 3e-14
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
E+AA+ ++++ ATA KL EA +AADESER K +ENR +++++ +
Sbjct: 43 ELAAMQKKLKGTEDELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEL 102
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 103 QEIQLKEAKHIAEEADRKYEEVAR 126
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 128 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 167
>AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein.
Length = 224
Score = 72.5 bits (170), Expect = 4e-13
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +3
Query: 72 ATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVA 251
ATA KL EA +AADESER K +ENR +++++ + E QL +AK IAEE+D+KYEEVA
Sbjct: 47 ATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVA 106
Query: 252 R 254
R
Sbjct: 107 R 107
>AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein.
Length = 232
Score = 54.4 bits (125), Expect = 1e-07
Identities = 39/84 (46%), Positives = 46/84 (54%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRRIQ ATA KL EA +AADE + ME +
Sbjct: 48 EVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADEKK-----------ME-----L 91
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
E QL +AK IAEE+D+KYEEVAR
Sbjct: 92 QEIQLKEAKHIAEEADRKYEEVAR 115
>AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion
oncoprotein type 1 protein.
Length = 227
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 135 KALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
K +ENR +++++ I E QL +AK IAEE+D+KYEEVAR
Sbjct: 2 KVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVAR 41
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEEL+ V NNLKSLE +
Sbjct: 43 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAA 84
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +3
Query: 135 KALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
K +ENR +++++ + E QL +AK IAEE+D+KYEEVAR
Sbjct: 2 KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVAR 41
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 82
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +3
Query: 135 KALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
K +ENR +++++ + E QL +AK IAEE+D+KYEEVAR
Sbjct: 2 KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVAR 41
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 82
>AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +3
Query: 135 KALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
K +ENR +++++ + E QL +AK IAEE+D+KYEEVAR
Sbjct: 2 KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVAR 41
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E DL K ELEEEL+ V NNLKSLE
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLE 82
>AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ35393 fis, clone SKNSH2000971, highly similar to
TROPOMYOSIN, CYTOSKELETAL TYPE. ).
Length = 183
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
K+ Q AD++E + L+ +E +++ + E QL +AK IAEE+D+KYEEVAR
Sbjct: 13 KIQVLQQQADDAEERAERLQRE--VEGEKMELQEIQLKEAKHIAEEADRKYEEVAR 66
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
+VA+LNRRIQ ATA KL EA + + + + L+ TN +
Sbjct: 84 DVASLNRRIQLVEEELDRAQERLATALQKLEEAELSEGKCAELEEELKTVTN----NLKS 139
Query: 183 LEAQLSQAKSIAEESDKKYEEV 248
LEA QA+ +++ D+ EE+
Sbjct: 140 LEA---QAEKYSQKEDRYEEEI 158
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 317 KIVELEEELRVVGNNLKSLE 376
K ELEEEL+ V NNLKSLE
Sbjct: 122 KCAELEEELKTVTNNLKSLE 141
>AK124171-1|BAC85794.1| 534|Homo sapiens protein ( Homo sapiens
cDNA FLJ42177 fis, clone THYMU2030264. ).
Length = 534
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
L E + E E RKA E +E++ +LE +AK AEE+D + EE
Sbjct: 211 LEELQKKKKEEEEARKATEEELRLEEENRRLLELMKVKAKE-AEETDNEVEE 261
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
L ++E +L K +LEEELR V NNLKSLE +
Sbjct: 16 LVILEGELERAEERAEVSESKCGDLEEELRTVTNNLKSLEAA 57
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 213 IAEESDKKYEEVAR 254
IAEE+D+KYEEVAR
Sbjct: 1 IAEEADRKYEEVAR 14
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 376
L ++E +L K +LEEEL++V NNLKSLE
Sbjct: 16 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLE 55
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 213 IAEESDKKYEEVAR 254
IAE+SD+KYEEVAR
Sbjct: 1 IAEDSDRKYEEVAR 14
>X14723-1|CAA32847.1| 449|Homo sapiens protein ( Human SP-40,40
mRNA for complement-associated protein SP-40,40 alpha-1
and beta-1 chain. ).
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>M74816-1|AAA60321.1| 389|Homo sapiens sulfated glycoprotein-2
protein.
Length = 389
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 240 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 297
>M64722-1|AAB06508.1| 449|Homo sapiens TRPM-2 protein.
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>M63379-1|AAB06507.1| 449|Homo sapiens TRPM-2 protein.
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>M25915-1|AAA35692.1| 448|Homo sapiens protein ( Human complement
cytolysis inhibitor (CLI) mRNA, complete cds. ).
Length = 448
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 299 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 356
>L00974-1|AAA60567.1| 310|Homo sapiens 'SP40,40' protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 161 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 218
>J02908-1|AAA51765.1| 416|Homo sapiens APOJ protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 267 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 324
>BC019588-1|AAH19588.1| 449|Homo sapiens CLU protein protein.
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>BC010514-1|AAH10514.1| 449|Homo sapiens CLU protein protein.
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>AY513288-1|AAT08041.1| 449|Homo sapiens aging-associated protein 4
protein.
Length = 449
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>AY341244-1|AAP88927.1| 447|Homo sapiens clusterin (complement
lysis inhibitor, SP-40,40, sulfated glycoprotein 2,
testo protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 114 DESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
D+ ++ R+ L + + A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 300 DQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 357
>AK090445-1|BAC03426.1| 282|Homo sapiens FLJ00366 protein protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -1
Query: 243 LRISCPTPRRWTSPVTVEP-PRWQRDHPPCWCGSPAPC 133
L +CP PR + P P RW PPC C P PC
Sbjct: 37 LHSTCPAPRLFLPPPLAVPLSRW----PPCSCLIPPPC 70
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 31.5 bits (68), Expect = 0.96
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRC-HL 184
G P P G +G S R RG PG R GEP + G +
Sbjct: 2228 GAQGPAGPAGPPGLIGEQGISGPRGSGGARGAPGERGRTGPLGRKGEPGEPGPKGGIGNP 2287
Query: 185 GGSTVTGEVHRRGVGQEIRRG 247
G TG+ R GVG E RRG
Sbjct: 2288 GPRGETGDDGRDGVGSEGRRG 2308
>AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein minor isoform protein.
Length = 142
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
+ +VE +L K +LEEEL+ V NNLKSLE +
Sbjct: 24 IQLVEEELDRAQERAEVSELKCGDLEEELKNVTNNLKSLEAA 65
>M26072-1|AAA51555.1| 187|Homo sapiens PLI protein.
Length = 187
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = -1
Query: 189 PPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRW-RSRDAPRTSRGPPPAVG--YVG 19
PP WQ CG +PC+ +H + W W R R P +G VG
Sbjct: 15 PPVWQPQVRGRGCGIQSPCLDQPLHSCDSFQPALWHWGRGRGQSERGHSFPTPLGEFRVG 74
Query: 18 SGQ 10
G+
Sbjct: 75 GGR 77
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
QP+ +CPTP P P R HPP P P V + P P +
Sbjct: 639 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPP----GPMPSVGSMPSAGP-MPSAGPMPSAG 693
Query: 69 DAPRTSRGPPPAVGYVGSGQP 7
P GPP ++G P
Sbjct: 694 PVPSARPGPPTTANHLGLSVP 714
>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
Length = 1048
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
QP+ +CPTP P P R HPP P P V + P P +
Sbjct: 557 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPP----GPMPSVGSMPSAGP-MPSAGPMPSAG 611
Query: 69 DAPRTSRGPPPAVGYVGSGQP 7
P GPP ++G P
Sbjct: 612 PVPSARPGPPTTANHLGLSVP 632
>BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein.
Length = 743
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
QP+ +CPTP P P R HPP P P V + P P +
Sbjct: 252 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPP----GPMPSVGSMPSAGP-MPSAGPMPSAG 306
Query: 69 DAPRTSRGPPPAVGYVGSGQP 7
P GPP ++G P
Sbjct: 307 PVPSARPGPPTTANHLGLSVP 327
>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
protein.
Length = 1061
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
QP+ +CPTP P P R HPP P P V + P P +
Sbjct: 570 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPP----GPMPSVGSMPSAGP-MPSAGPMPSAG 624
Query: 69 DAPRTSRGPPPAVGYVGSGQP 7
P GPP ++G P
Sbjct: 625 PVPSARPGPPTTANHLGLSVP 645
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
QP+ +CPTP P P R HPP P P V + P P +
Sbjct: 639 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPP----GPMPSVGSMPSAGP-MPSAGPMPSAG 693
Query: 69 DAPRTSRGPPPAVGYVGSGQP 7
P GPP ++G P
Sbjct: 694 PVPSARPGPPTTANHLGLSVP 714
>BC042172-1|AAH42172.1| 184|Homo sapiens ZMYM6 protein protein.
Length = 184
Score = 30.3 bits (65), Expect = 2.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 189 PPRWQRDHPPCWCGSP 142
PPRW P CWC P
Sbjct: 168 PPRWPSRPPSCWCSRP 183
>AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3845 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3880
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 5931 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 5966
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3519 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3554
>AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3845 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3880
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 5931 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 5966
>AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3845 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3880
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 5931 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 5966
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3519 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3554
>AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3845 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3880
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 5931 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 5966
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3519 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3554
>AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3845 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3880
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 5931 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 5966
>AK096713-1|BAC04848.1| 990|Homo sapiens protein ( Homo sapiens
cDNA FLJ39394 fis, clone PLACE6007925, moderately
similar to Homo sapiens mRNA for actin binding protein
ABP620. ).
Length = 990
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 353 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 388
>AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens cDNA
FLJ30627 fis, clone CTONG2001955, moderately similar to
Homo sapiens mRNA for actin binding protein ABP620. ).
Length = 1174
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 1078 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 1113
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
eA protein.
Length = 5171
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 192 QLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPRSVPSP 308
QL +A+S+ + + YEE WPWL T S +P+P
Sbjct: 3519 QLERAQSLVNQFWETYEE---LWPWLTETQSIISQLPAP 3554
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1163 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1196
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1270 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1303
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 541 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 574
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1156 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1189
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRC-HL 184
G P P G +G S R G PG R GEP + G +
Sbjct: 30 GAQGPAGPAGPPGLIGEQGISGPRGSGGAAGAPGERGRTGPLGRKGEPGEPGPKGGIGNR 89
Query: 185 GGSTVTGEVHRRGVGQEIRRG 247
G TG+ R GVG E RRG
Sbjct: 90 GPRGETGDDGRDGVGSEGRRG 110
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>AL662844-15|CAM25639.1| 871|Homo sapiens coiled-coil alpha-helical
rod protein 1 protein.
Length = 871
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -1
Query: 219 RRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
R W S +T + PR CWC P A W R WRWRSR
Sbjct: 9 RPWASTLTGKDPRVMA----CWCLDGLPSGLAE-----PW-RELWRWRSR 48
>AL662844-14|CAM25638.1| 216|Homo sapiens coiled-coil alpha-helical
rod protein 1 protein.
Length = 216
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -1
Query: 219 RRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSR 70
R W S +T + PR CWC P A W R WRWRSR
Sbjct: 9 RPWASTLTGKDPRVMA----CWCLDGLPSGLAE-----PW-RELWRWRSR 48
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1270 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1303
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPG 109
G P P GGPR GA DR GQPG
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
>AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein.
Length = 2588
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRC-HL 184
G P P G +G S R G PG R GEP + G +
Sbjct: 2228 GAQGPAGPAGPPGLIGEQGISGPRGSGGAAGAPGERGRTGPLGRKGEPGEPGPKGGIGNR 2287
Query: 185 GGSTVTGEVHRRGVGQEIRRG 247
G TG+ R GVG E RRG
Sbjct: 2288 GPRGETGDDGRDGVGSEGRRG 2308
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 GCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRC-HL 184
G P P G +G S R G PG R GEP + G +
Sbjct: 753 GAQGPAGPAGPPGLIGEQGISGPRGSGGAAGAPGERGRTGPLGRKGEPGEPGPKGGIGNR 812
Query: 185 GGSTVTGEVHRRGVGQEIRRG 247
G TG+ R GVG E RRG
Sbjct: 813 GPRGETGDDGRDGVGSEGRRG 833
>L29385-1|AAA59205.1| 2270|Homo sapiens voltage-dependent calcium
channel alpha-1E-3 protein.
Length = 2270
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>L29384-1|AAA59204.1| 2251|Homo sapiens voltage-dependent calcium
channel alpha-1E-1 protein.
Length = 2251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 874 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 906
>L27745-1|AAA72125.1| 2312|Homo sapiens voltage-operated calcium
channel, alpha-1 subunit protein.
Length = 2312
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 892 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 924
>BC100976-1|AAI00977.1| 416|Homo sapiens RHBDL3 protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 5 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRG 100
+G P GGPR RG HR+ +RG
Sbjct: 362 AGLKAAASPLRAGGPRSGRGGKSSTHRERLRG 393
>BC035621-1|AAH35621.1| 893|Homo sapiens chromosome 12 open reading
frame 25 protein.
Length = 893
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/78 (20%), Positives = 40/78 (51%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
++ + ++A+ +++ + LEN ++ R L+A + K + E+ + + +P
Sbjct: 732 QIMKETEASYKAQNLYIFLENIDRLQSLR---LQAWTDKQKGLEEKHRECLSSMVTMFPK 788
Query: 267 LRLTWSAPRSVPSPVNPK 320
L+L W+ ++P +PK
Sbjct: 789 LQLEWNVHLNIPEVTSPK 806
>BC026101-1|AAH26101.1| 345|Homo sapiens nudE nuclear distribution
gene E homolog (A. nidulans)-like 1 protein.
Length = 345
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 117 ESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
E E +++ LE++ +V++LE LSQ ++I E+ K E+ ++
Sbjct: 75 EVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQA 121
>AY004871-1|AAF97497.1| 345|Homo sapiens Nudel protein.
Length = 345
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 117 ESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
E E +++ LE++ +V++LE LSQ ++I E+ K E+ ++
Sbjct: 75 EVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQA 121
>AL590998-3|CAI22329.1| 2313|Homo sapiens calcium channel,
voltage-dependent, R type, alphabeta family protein.
Length = 2313
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL590998-2|CAI22328.1| 2251|Homo sapiens calcium channel,
voltage-dependent, R type, alphaeroid dehydrogenase-like
(HSPC protein.
Length = 2251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 874 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 906
>AL590998-1|CAI22327.1| 2270|Homo sapiens calcium channel,
voltage-dependent, R type, alpha protein.
Length = 2270
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL359270-3|CAI14655.1| 2313|Homo sapiens calcium channel,
voltage-dependent, R type, alphaiae) protein.
Length = 2313
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL359270-2|CAI14654.1| 2251|Homo sapiens calcium channel,
voltage-dependent, R type, alphaferase protein.
Length = 2251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 874 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 906
>AL359270-1|CAI14653.1| 2270|Homo sapiens calcium channel,
voltage-dependent, R type, alphaferase protein.
Length = 2270
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL161734-3|CAH72676.1| 2313|Homo sapiens calcium channel,
voltage-dependent, R type, alphalog 1 protein.
Length = 2313
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL161734-2|CAH72677.1| 2251|Homo sapiens calcium channel,
voltage-dependent, R type, alphalog 1 protein.
Length = 2251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 874 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 906
>AL161734-1|CAH72675.1| 2270|Homo sapiens calcium channel,
voltage-dependent, R type, alphalog 1 protein.
Length = 2270
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL160059-3|CAI17082.1| 2313|Homo sapiens calcium channel,
voltage-dependent, R type, alpha21 (RPL21) protein.
Length = 2313
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL160059-2|CAI17081.1| 2251|Homo sapiens calcium channel,
voltage-dependent, R type, alphaamily M, member 3
protein.
Length = 2251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 874 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 906
>AL160059-1|CAI17083.1| 2270|Homo sapiens calcium channel,
voltage-dependent, R type, alphalo2, SUR4/Elo3,
yeast)-like 3 protein.
Length = 2270
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 893 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 925
>AL109964-5|CAI42207.1| 132|Homo sapiens chromosome 20 open reading
frame 102 protein.
Length = 132
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = -1
Query: 183 RWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPL 4
R QR P G P AR RP R+ R AP+ +G A+G G QPL
Sbjct: 72 RLQRRQGPAPQGQGLPAGAARGELRPASARSPSRRARPAAPQARQGAEEALGGPGGLQPL 131
>AK128697-1|BAC87576.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ46864 fis, clone UTERU3011579. ).
Length = 211
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 234 SCPTPRRWTS-PVTVEP-PRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDA 64
SCP+ W S PV +E R + P C C P+PC + R G R+A RS A
Sbjct: 42 SCPSHGCWLSLPVFLETRSRQEPCSPGCNCSHPSPC-YRPCSWRLGAGRSAKAGRSAGA 99
>AF223391-2|AAF37688.1| 2162|Homo sapiens calcium channel alpha1E
subunit, delta19 delta40 delta46 splice variant protein.
Length = 2162
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 785 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 817
>AF223391-1|AAF37687.1| 2224|Homo sapiens calcium channel alpha1E
subunit, delta39 splice variant protein.
Length = 2224
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 804 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 836
>AF217798-1|AAF24516.3| 345|Homo sapiens endooligopeptidase A
protein.
Length = 345
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 117 ESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
E E +++ LE++ +V++LE LSQ ++I E+ K E+ ++
Sbjct: 75 EVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQA 121
>AF182078-1|AAG43425.1| 345|Homo sapiens mitosin-associated protein
MITAP1 protein.
Length = 345
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 117 ESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
E E +++ LE++ +V++LE LSQ ++I E+ K E+ ++
Sbjct: 75 EVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQA 121
>AB209499-1|BAD92736.1| 1869|Homo sapiens calcium channel,
voltage-dependent, alpha 1E subunit variant protein.
Length = 1869
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 17 EPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 115
+PT AGGG V R RHRQ+ R RR
Sbjct: 492 DPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRR 524
>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
Length = 1263
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
K E S+A + K L++ D+R+ ++ +L + +++ + +K++EE
Sbjct: 947 KGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEE 999
>DQ227317-1|ABB51162.1| 603|Homo sapiens synphilin-1A protein.
Length = 603
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 150 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 208
>BC094759-1|AAH94759.1| 603|Homo sapiens SNCAIP protein protein.
Length = 603
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 150 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 208
>BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.
Length = 1139
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
K E S+A + K L++ D+R+ ++ +L + +++ + +K++EE
Sbjct: 828 KGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEE 880
>BC040552-1|AAH40552.1| 1016|Homo sapiens SNCAIP protein protein.
Length = 1016
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 563 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 621
>BC033743-1|AAH33743.1| 553|Homo sapiens SNCAIP protein protein.
Length = 553
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 150 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 208
>AY898961-1|AAX84028.1| 540|Homo sapiens type XXIII collagen
protein.
Length = 540
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 44 GPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLG--GSTVTGEVHR 217
GPR +G +R + RG PGR+ ++ GEP G C +G G V G H+
Sbjct: 484 GPRGEKGDRSERGEKGERGVPGRKGVKGQ---KGEPGPPGLDQPCPVGPDGLPVPGCWHK 540
>AY172563-1|AAN87347.1| 76|Homo sapiens apolipoprotein J protein.
Length = 76
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 177 AILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSA 287
A L +L ++ +AE +KY E+ +S+ W L S+
Sbjct: 9 AKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSS 45
>AY158895-1|AAO18361.1| 540|Homo sapiens alpha 1 type XXIII
collagen protein.
Length = 540
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 44 GPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLG--GSTVTGEVHR 217
GPR +G +R + RG PGR+ ++ GEP G C +G G V G H+
Sbjct: 484 GPRGEKGDRSERGEKGERGVPGRKGVKGQ---KGEPGPPGLDQPCPVGPDGLPVPGCWHK 540
>AL137461-1|CAB70749.1| 201|Homo sapiens hypothetical protein
protein.
Length = 201
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 44 GPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLG--GSTVTGEVHR 217
GPR +G +R + RG PGR+ ++ GEP G C +G G V G H+
Sbjct: 145 GPRGEKGDRSERGEKGERGVPGRKGVKGQ---KGEPGPPGLDQPCPVGPDGLPVPGCWHK 201
>AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ90018 fis, clone HEMBA1000732, highly similar to
Homo sapiens mRNA for latent transforming growth
factor-beta ).
Length = 636
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -1
Query: 108 PGWPRTAWRWRSRDAPRT---SRGPPPAVGYVGS 16
P P T W +RSRD R+ S PP Y GS
Sbjct: 503 PPGPGTRWPYRSRDTRRSFPESEEPPEGGSYAGS 536
>AF167306-1|AAG17478.1| 919|Homo sapiens synuclein alpha
interacting protein protein.
Length = 919
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 516 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 574
>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
Length = 1261
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
K E S+A + K L++ D+R+ ++ +L + +++ + +K++EE
Sbjct: 945 KGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEE 997
>AF076929-1|AAD30362.1| 919|Homo sapiens synphilin 1 protein.
Length = 919
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 516 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 574
>AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform
protein.
Length = 1144
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
K E S+A + K L++ D+R+ ++ +L + +++ + +K++EE
Sbjct: 828 KGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEE 880
>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
protein.
Length = 1278
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/53 (22%), Positives = 29/53 (54%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEE 245
K E S+A + K L++ D+R+ ++ +L + +++ + +K++EE
Sbjct: 962 KGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEE 1014
>AB110789-1|BAD19018.1| 859|Homo sapiens synphilin-1b protein
protein.
Length = 859
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 456 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 514
>AB110788-1|BAD19017.1| 919|Homo sapiens synphilin-1a protein
protein.
Length = 919
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 516 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQW 574
>X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin C precursor. ).
Length = 572
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin A precursor. ).
Length = 702
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A
mRNA, 3'end. ).
Length = 515
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 117 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 176
Query: 255 S 257
S
Sbjct: 177 S 177
>M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C
mRNA, complete cds. ).
Length = 572
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open reading
frame 24 protein.
Length = 757
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein.
Length = 698
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for
IMAGE:4294615) protein.
Length = 414
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 480
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.12 protein.
Length = 487
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein.
Length = 614
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +2
Query: 5 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*I---RANTQGAGEPHQHG 163
+G P + P GP G Q +RGQPG + + GEP HG
Sbjct: 282 TGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHG 337
>AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein.
Length = 491
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 185 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 244
Query: 255 S 257
S
Sbjct: 245 S 245
>AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein.
Length = 513
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 207 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 266
Query: 255 S 257
S
Sbjct: 267 S 267
>AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein.
Length = 614
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
T +AKL A Q+A+ + + A R+ L AQLSQ + + K ++
Sbjct: 266 TYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLED 325
Query: 255 S 257
S
Sbjct: 326 S 326
>AK001617-1|BAA91791.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ10755 fis, clone NT2RP3004569, weakly similar to
ANKYRIN, BRAIN VARIANT 1. ).
Length = 597
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 90 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPW 266
+S ASQ ++++++ R +++ LEAQ S+ KS+ +R W
Sbjct: 144 MSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSPPASRKSQW 202
>AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced
blocking factor 1 protein.
Length = 757
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY 239
L R E+DR+ L+AQL ++K EE +KY
Sbjct: 330 LSVRCAHEEDRLERLQAQLEESKKAREEMYEKY 362
>AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth factor
receptor 4 variant protein.
Length = 1034
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 189 PPRWQRDHPPCWCGSPAPCVFARI 118
P W + H PC C P CV R+
Sbjct: 1 PCMWHQQHVPCVCVCPYVCVCMRV 24
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +2
Query: 5 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*I---RANTQGAGEPHQHG 163
+G P + P GP G Q +RGQPG + + GEP HG
Sbjct: 437 TGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHG 492
>AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein.
Length = 1313
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 2 RSGCPEPTYPTAGGGPREVRGASRDRHRQAVRG 100
R PEP +AGGG VR RDR + + G
Sbjct: 4 RRRAPEPRDASAGGGLPAVRALRRDRQKVSTVG 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,728,463
Number of Sequences: 237096
Number of extensions: 1148643
Number of successful extensions: 6252
Number of sequences better than 10.0: 190
Number of HSP's better than 10.0 without gapping: 5324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6207
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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