Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1529X
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 84 3e-17
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 84 3e-17
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 84 3e-17
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 79 8e-16
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 79 8e-16
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 79 8e-16
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 79 8e-16
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 79 8e-16
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 79 8e-16
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 77 4e-15
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 77 4e-15
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 72 2e-13
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 36 0.013
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 36 0.013
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 33 0.052
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 0.49
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 0.64
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 29 1.5
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 29 1.5
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 29 1.5
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 29 1.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 24 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 24 1.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 2.0
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 2.0
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 2.0
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 2.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 2.6
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 2.6
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 2.6
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 27 3.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 4.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 4.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 4.5
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 27 4.5
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 4.5
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 27 6.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 22 6.4
Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical pr... 26 7.9
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 26 7.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 26 7.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 7.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 7.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 23 8.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 23 9.0
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 84.2 bits (199), Expect = 3e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVAALNRRI TAT+KL +A++AADE++R RK++E R+ +++R
Sbjct: 56 EVAALNRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANF 115
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
LE Q+ +AK IAE++D+KYEEVAR
Sbjct: 116 LETQVDEAKVIAEDADRKYEEVAR 139
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 182
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 84.2 bits (199), Expect = 3e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVAALNRRI TAT+KL +A++AADE++R RK++E R+ +++R
Sbjct: 56 EVAALNRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANF 115
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
LE Q+ +AK IAE++D+KYEEVAR
Sbjct: 116 LETQVDEAKVIAEDADRKYEEVAR 139
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 182
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 84.2 bits (199), Expect = 3e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVAALNRRI TAT+KL +A++AADE++R RK++E R+ +++R
Sbjct: 56 EVAALNRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANF 115
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
LE Q+ +AK IAE++D+KYEEVAR
Sbjct: 116 LETQVDEAKVIAEDADRKYEEVAR 139
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 182
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVA+LNRR+ AT KL EA+ DESER+RK +ENR+ +++R
Sbjct: 84 EVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANT 143
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
+EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 144 VEAQLKEAQLLAEEADRKYDEVAR 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 210
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 77.0 bits (181), Expect = 4e-15
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVAALNRRI TAT+KL +A++AADE++R R+AL N+ +M+DDR +
Sbjct: 56 EVAALNRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSD 115
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
LE +L + +SI E++ K EEVAR
Sbjct: 116 LERKLRECQSILHETENKAEEVAR 139
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 182
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 77.0 bits (181), Expect = 4e-15
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 3 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAI 182
EVAALNRRI TAT+KL +A++AADE++R R+AL N+ +M+DDR +
Sbjct: 56 EVAALNRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSD 115
Query: 183 LEAQLSQAKSIAEESDKKYEEVAR 254
LE +L + +SI E++ K EEVAR
Sbjct: 116 LERKLRECQSILHETENKAEEVAR 139
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 182
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 71.7 bits (168), Expect = 2e-13
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +3
Query: 78 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVAR 254
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+ +AEE+D+KY+EVAR
Sbjct: 18 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVAR 76
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/42 (71%), Positives = 30/42 (71%)
Frame = +2
Query: 257 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVS 382
LAMVEADL KIVELEEELRVVGNNLKSLEVS
Sbjct: 78 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVS 119
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 35.5 bits (78), Expect = 0.013
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 72 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEV 248
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 249 ARSWPWLRLTWSAPRSVPSPVN 314
L + S P S+P+P +
Sbjct: 471 LSM--TLTVPASEPASLPAPTD 490
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 35.5 bits (78), Expect = 0.013
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 72 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEV 248
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 249 ARSWPWLRLTWSAPRSVPSPVN 314
L + S P S+P+P +
Sbjct: 471 LSM--TLTVPASEPASLPAPTD 490
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 33.5 bits (73), Expect = 0.052
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 117 ESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEV--ARSWPW 266
+ E+ RK LE R N E R Q ++ + +AEE K YEE RS W
Sbjct: 156 DREKKRKMLEERANEEKRRSTEALVQAAEKRKLAEEFAKNYEESRDERSGSW 207
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 78 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
A+A+ A + E+++KA ++ + R LEA QAK +E+ + EE+ +S
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLKS 880
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 78 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
A+A+ A + E+++KA ++ + R LEA QAK +E+ + EE+ +S
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLKS 880
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.3 bits (65), Expect = 0.49
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 PEPTYPTAGG--GPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLG 187
P+P P G GPR RG + + + G PG+ R G GEP Q G + L
Sbjct: 214 PKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRG---GPGEPGQDGAPGQPGLP 270
Query: 188 GSTVT 202
GS T
Sbjct: 271 GSDGT 275
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 0.64
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = -1
Query: 246 PLRISCPTPRRWTSPV-TVEPPRWQRDHPPCWCGSP----APCVFARIHRRPGWPRTAWR 82
P + P PRR SP + + PR +R SP +P R + P R+ R
Sbjct: 443 PSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRR 502
Query: 81 WRSRDAPRTSRGPPP 37
RS + SR PPP
Sbjct: 503 RRSPSSSSRSRSPPP 517
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY-EEVARSWPWLRLTWSAPRSVPSPVNP 317
+E R +DR+ ILE L +K ++ KKY +EV R +R + P V P
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKP 791
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY-EEVARSWPWLRLTWSAPRSVPSPVNP 317
+E R +DR+ ILE L +K ++ KKY +EV R +R + P V P
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKP 791
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 29 PTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 166
P GP GA ++ V GQPG + G G+P Q GG
Sbjct: 103 PAGPPGPPGQPGAQGEQGHVEVSGQPGAPRPQGPAGGPGQPVQSGG 148
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 141 LENRTNMEDDRVAILEAQLSQAKSIAEESDKKY-EEVARSWPWLRLTWSAPRSVPSPVNP 317
+E R +DR+ ILE L +K ++ KKY +EV R +R + P V P
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKP 791
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 153 CGSPAPCVFARIHRRPGWPRTA 88
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 165 PPCWCGSPA 139
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 153 CGSPAPCVFARIHRRPGWPRTA 88
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 165 PPCWCGSPA 139
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 11/61 (18%)
Frame = -1
Query: 249 QPLRISCPTPRRWTSPVTVEP----PRWQRDH-------PPCWCGSPAPCVFARIHRRPG 103
QP P P W P + P P W R+ PP W P P HRRP
Sbjct: 17 QPDFFERPPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPP 76
Query: 102 W 100
W
Sbjct: 77 W 77
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 87 KLSEASQAADESER-IRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
K E + + ER IR+ +E + EDDR+A A+L A+ + E+D+K E S
Sbjct: 1011 KEREKREEKERKEREIREIMERKKREEDDRIA---AKLQIAQQL--ENDRKMREAEES 1063
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +2
Query: 5 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHL 184
+G P P P GP+ G + RG PG R + G+P G
Sbjct: 136 AGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGR 195
Query: 185 GGSTVTG 205
GG G
Sbjct: 196 GGQRSRG 202
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +2
Query: 5 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHL 184
+G P P P GP+ G + RG PG R + G+P G
Sbjct: 136 AGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGR 195
Query: 185 GGSTVTG 205
GG G
Sbjct: 196 GGQRSRG 202
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 374 PEISGCYQRHGAPPQAQRFWIHRTRHAPRRAPSQPQPWP 258
P + C G PP Q++ + R P QPQP P
Sbjct: 96 PPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 374 PEISGCYQRHGAPPQAQRFWIHRTRHAPRRAPSQPQPWP 258
P + C G PP Q++ + R P QPQP P
Sbjct: 96 PPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 374 PEISGCYQRHGAPPQAQRFWIHRTRHAPRRAPSQPQPWP 258
P + C G PP Q++ + R P QPQP P
Sbjct: 96 PPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 2.6
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -1
Query: 222 PRRWTSPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGP 43
P + P+T P R PP GSP P A +PG+ + + P+ RG
Sbjct: 122 PAQPCDPITPPPCRPCPQGPPGAPGSPGPQGDAGAPGQPGF-GSGFGAPGPAGPKGQRGA 180
Query: 42 PPAVGYVGS-GQP 7
P G G+ GQP
Sbjct: 181 PGHPGQAGAPGQP 193
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 14 PEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEP 151
P PT P GPR + G + + GQPG R AG P
Sbjct: 208 PGPTGPPGKVGPRGLSGGKGHDGKPGLGGQPGVRGAVGARGDAGNP 253
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 123 ERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEV 248
E +RK R N+E R L+ L K E ++KK+EE+
Sbjct: 106 EDVRKVELQRANLEKQRTEALDIHLETMK---ELNEKKFEEI 144
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 102 SQAADESERIRKALENRTNMED---DRVAILEAQLSQAKSIAEESDKK 236
S DE E+ KA+EN ++ED D++ LE QL+ + + E +++
Sbjct: 1152 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1199
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 102 SQAADESERIRKALENRTNMED---DRVAILEAQLSQAKSIAEESDKK 236
S DE E+ KA+EN ++ED D++ LE QL+ + + E +++
Sbjct: 1225 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1272
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 102 SQAADESERIRKALENRTNMED---DRVAILEAQLSQAKSIAEESDKK 236
S DE E+ KA+EN ++ED D++ LE QL+ + + E +++
Sbjct: 1225 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1272
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 78 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYEEVARS 257
A LS A+ +E E+ + E + R+ +LE +L+ + + + S
Sbjct: 60 AQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELNFSPRRLTANTTRSPV---S 116
Query: 258 WPWLRLTWSAPRSVPSP 308
PWL+L RSVP P
Sbjct: 117 SPWLKLILRELRSVPRP 133
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 84 AKLSEASQAADESERIRKALENRTNMED------DRVAILEAQLSQAKSIAEESDKK 236
A+L +A QAA +++ + + + E + A EAQL+Q IAEE KK
Sbjct: 1229 AQLIQALQAAKDAQTAKLVAQEKAKKEAQEKARREAEAKKEAQLAQLMKIAEERSKK 1285
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 GCPEPT-YPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 166
G P P P A GGP + GA + GQPG N G+P Q GG
Sbjct: 229 GPPGPAGSPGAPGGPGQA-GAPGPKGPSGAPGQPGAD---GNPGAPGQPGQSGG 278
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 GCPEPT-YPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 166
G P P P A GGP + GA + GQPG N G+P Q GG
Sbjct: 229 GPPGPAGSPGAPGGPGQA-GAPGPKGPSGAPGQPGAD---GNPGAPGQPGQSGG 278
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 GCPEPT-YPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 166
G P P P A GGP + GA + GQPG N G+P Q GG
Sbjct: 229 GPPGPAGSPGAPGGPGQA-GAPGPKGPSGAPGQPGAD---GNPGAPGQPGQSGG 278
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 11 CPE-PTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHG 163
CPE P P GP G + + R + G+PG R +G P G
Sbjct: 135 CPEAPAGPPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADG 186
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 11 CPE-PTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHG 163
CPE P P GP G + + R + G+PG R +G P G
Sbjct: 188 CPEAPAGPPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADG 239
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 162 EDDRVAILEAQLSQAKSIAEESDKKYEEVARSWPWLRLTWSAPR 293
E R+ +L+ ++K E D+K E+ A + P+ + +++PR
Sbjct: 43 EKKRLGLLDPTTERSKKRKVEKDEKSEKPAENSPFKKNQYNSPR 86
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 21.8 bits (44), Expect(3) = 6.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 165 PPCWCGSPA 139
PPC CG P+
Sbjct: 36 PPCGCGGPS 44
Score = 21.0 bits (42), Expect(3) = 6.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 153 CGSPAPC 133
CG PAPC
Sbjct: 68 CGGPAPC 74
Score = 20.6 bits (41), Expect(3) = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 45 PPPAVGYVGSGQ 10
PPPA GY +G+
Sbjct: 93 PPPAGGYATAGR 104
>Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical
protein B0391.5 protein.
Length = 378
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/64 (18%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 KLSEASQAADESERIRKALENRTN-MEDDRVAILEAQLSQAKSIAEESDKKYEEVARSWP 263
K + + +++ AL + +N M+ ++ + ++ + ++ +++ KK E SW
Sbjct: 147 KYEDVDKGVPLGDQLELALHDLSNSMKHPKLQLNSFAITFSSALEQDARKKVIETFHSWK 206
Query: 264 WLRL 275
W R+
Sbjct: 207 WPRI 210
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 75 TATAKLSEASQAADESERIRKALENRTNMEDDRVAI--LEAQLSQAKSIAEESDKKYEE 245
+A ++ + +A E+E + E + E+ R LEA+L + AEES KK+EE
Sbjct: 135 SARNEMEKMLRAQIEAEMAVELAECKKRDEESRKKCKQLEAELERKVLEAEESRKKFEE 193
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 81 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYE 242
T+K S + ESE + A E D+ LEA+++ KS E+S + E
Sbjct: 9535 TSKTVAESAGSSESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETE 9588
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 81 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYE 242
T+K S + ESE + A E D+ LEA+++ KS E+S + E
Sbjct: 9555 TSKTVAESAGSSESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETE 9608
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 81 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKSIAEESDKKYE 242
T+K S + ESE + A E D+ LEA+++ KS E+S + E
Sbjct: 9555 TSKTVAESAGSSESETQKVADATSKQKETDKKQKLEAEITAKKSADEKSKLETE 9608
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 26 YPTAGGGPREVRGASRDRHRQAVRGQPG 109
Y GGP V GAS + Q GQ G
Sbjct: 79 YAAPFGGPGPVGGASYSQGPQGFGGQVG 106
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 8 GCPEPTYPTAGGG 46
GC P+ P+ GGG
Sbjct: 26 GCCPPSQPSCGGG 38
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 26 YPTAGGGPREVRGASRDRHRQAVRGQPG 109
Y GGP V GAS + Q GQ G
Sbjct: 79 YAAPFGGPGPVGGASYSQGPQGFGGQVG 106
Score = 21.8 bits (44), Expect(2) = 9.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 8 GCPEPTYPTAGGG 46
GC P+ P+ GGG
Sbjct: 26 GCCPPSQPSCGGG 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,976,701
Number of Sequences: 27780
Number of extensions: 146813
Number of successful extensions: 714
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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