Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1524
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    29   0.13 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   1.6  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   6.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.5  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = +2

Query: 86  QKCGDDNIPLADDDPQVIISDDTDNNRLDHGR------SMDSLPSSYTAGSSSPGLN 238
           Q  G+D +    + P+ ++++D+ N+ L H +      S DSL  + +  SS+  L+
Sbjct: 826 QVLGEDTVKFISEYPRTLVANDSTNDLLSHNKVSSLHGSCDSLSRNVSQASSTSDLS 882


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   LKLTSILIFNLCPVY 46
           L LTS+LIF LC +Y
Sbjct: 131 LILTSVLIFGLCAIY 145


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 316 LQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSAS 435
           +  T++DL + + + KEE +KL    Q L   I  +M  S
Sbjct: 45  VSKTVEDLQRSLAAEKEEKMKLTVLLQELQAQISIMMKKS 84


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 289 ARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 402
           A L++Q+  +   L    + +   +EEN  LR EN++L
Sbjct: 104 ALLMAQLQNIGAQLTTALEELRLCREENAALRRENELL 141


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 452 LLPIYKRSELFNHIIFIGFSNLC 520
           ++PIYK+ +  + I + G ++LC
Sbjct: 602 MVPIYKKGDRTDAINYRGITSLC 624


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 509 SNLCCCVGNINL 544
           SNL CC+G++ L
Sbjct: 197 SNLTCCIGDLGL 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,035
Number of Sequences: 2352
Number of extensions: 12129
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)