Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1524
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062684-1|AAH62684.1| 121|Homo sapiens short coiled-coil prote... 105 2e-22
BC016511-1|AAH16511.2| 115|Homo sapiens Similar to short coiled... 105 2e-22
AK027797-1|BAB55375.1| 122|Homo sapiens protein ( Homo sapiens ... 105 2e-22
AF330205-1|AAK01707.1| 82|Homo sapiens short coiled-coil prote... 105 2e-22
AB015335-1|BAA88116.1| 125|Homo sapiens HRIHFB2072 protein. 105 2e-22
AF448857-1|AAP97732.1| 54|Homo sapiens short coiled coil prote... 80 8e-15
AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens ... 35 0.22
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 33 0.90
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 0.90
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 0.90
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 33 0.90
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 33 1.2
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 33 1.2
BC001750-1|AAH01750.1| 458|Homo sapiens CEP72 protein protein. 32 1.6
BC000132-1|AAH00132.1| 647|Homo sapiens centrosomal protein 72k... 32 1.6
AK002071-1|BAA92068.1| 528|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK001427-1|BAA91685.1| 458|Homo sapiens protein ( Homo sapiens ... 32 1.6
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 31 3.6
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 31 3.6
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 31 3.6
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 31 3.6
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 31 3.6
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 31 3.6
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 31 3.6
X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA) prot... 31 4.8
M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein. 31 4.8
M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein. 31 4.8
M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein. 31 4.8
M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyos... 31 4.8
M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblas... 31 4.8
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 31 4.8
BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 4.8
AL158199-3|CAI20490.1| 612|Homo sapiens chromosome 6 open readi... 31 4.8
AL138916-4|CAI14698.1| 612|Homo sapiens chromosome 6 open readi... 31 4.8
AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 4.8
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 4.8
AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta) is... 31 4.8
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 31 4.8
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 31 4.8
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 31 4.8
AL158199-2|CAI20489.1| 612|Homo sapiens chromosome 6 open readi... 30 6.4
AL138916-3|CAI14697.1| 612|Homo sapiens chromosome 6 open readi... 30 6.4
AB040952-1|BAA96043.1| 648|Homo sapiens KIAA1519 protein protein. 30 6.4
BX004861-1|CAI41713.1| 528|Homo sapiens chromosome X open readi... 30 8.4
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 30 8.4
BC101576-1|AAI01577.1| 528|Homo sapiens chromosome X open readi... 30 8.4
BC101572-1|AAI01573.1| 528|Homo sapiens gamma-taxilin protein. 30 8.4
AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein. 30 8.4
AY739713-1|AAW65982.1| 396|Homo sapiens CXORF15 protein. 30 8.4
AL929302-1|CAI41279.1| 528|Homo sapiens chromosome X open readi... 30 8.4
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 30 8.4
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 30 8.4
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 30 8.4
AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein varian... 30 8.4
AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein. 30 8.4
>BC062684-1|AAH62684.1| 121|Homo sapiens short coiled-coil protein
protein.
Length = 121
Score = 105 bits (251), Expect = 2e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 274 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 453
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 55 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 114
Query: 454 TPNIQKK 474
++K
Sbjct: 115 DTKSKRK 121
>BC016511-1|AAH16511.2| 115|Homo sapiens Similar to short
coiled-coil protein protein.
Length = 115
Score = 105 bits (251), Expect = 2e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 274 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 453
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 49 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 108
Query: 454 TPNIQKK 474
++K
Sbjct: 109 DTKSKRK 115
>AK027797-1|BAB55375.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ14891 fis, clone PLACE1004256, weakly similar to
Mus musculus short coiled coil protein SCOCO (Scoc)
mRNA. ).
Length = 122
Score = 105 bits (251), Expect = 2e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 274 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 453
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 56 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 115
Query: 454 TPNIQKK 474
++K
Sbjct: 116 DTKSKRK 122
>AF330205-1|AAK01707.1| 82|Homo sapiens short coiled-coil protein
SCOCO protein.
Length = 82
Score = 105 bits (251), Expect = 2e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 274 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 453
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 16 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 75
Query: 454 TPNIQKK 474
++K
Sbjct: 76 DTKSKRK 82
>AB015335-1|BAA88116.1| 125|Homo sapiens HRIHFB2072 protein.
Length = 125
Score = 105 bits (251), Expect = 2e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 274 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 453
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 59 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 118
Query: 454 TPNIQKK 474
++K
Sbjct: 119 DTKSKRK 125
>AF448857-1|AAP97732.1| 54|Homo sapiens short coiled coil protein
protein.
Length = 54
Score = 79.8 bits (188), Expect = 8e-15
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +1
Query: 328 LDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQSTTPNIQKK 474
+DDLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T ++K
Sbjct: 6 MDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 54
>AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens
cDNA FLJ30655 fis, clone DFNES2000268, weakly similar to
MYOSIN HEAVY CHAIN, STRIATED MUSCLE. ).
Length = 688
Score = 35.1 bits (77), Expect = 0.22
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 271 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
D EE +R + +LQN L+ + V E+ LKL+ EN+ L + E+L
Sbjct: 480 DSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESL 530
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 33.1 bits (72), Expect = 0.90
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +1
Query: 274 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 426
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 427 SASSVFQSTTPNIQKK 474
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.1 bits (72), Expect = 0.90
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +1
Query: 274 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 426
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 427 SASSVFQSTTPNIQKK 474
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.1 bits (72), Expect = 0.90
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +1
Query: 274 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 426
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 427 SASSVFQSTTPNIQKK 474
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 33.1 bits (72), Expect = 0.90
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +1
Query: 274 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 426
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1395 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1454
Query: 427 SASSVFQSTTPNIQKK 474
A + T +Q++
Sbjct: 1455 LAYDKLEKTKNRLQQE 1470
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 PDSGIDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLK-LRSENQVLGQYIENLMSA 432
PD G Q+E RL SQ+LEL+ + + +E K + + NQ++ ++ +N +
Sbjct: 676 PDIGQCHQDELERLKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNN 735
Query: 433 SSVF 444
SS F
Sbjct: 736 SSAF 739
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372
protein.
Length = 3225
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 PDSGIDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLK-LRSENQVLGQYIENLMSA 432
PD G Q+E RL SQ+LEL+ + + +E K + + NQ++ ++ +N +
Sbjct: 642 PDIGQCHQDELERLKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNN 701
Query: 433 SSVF 444
SS F
Sbjct: 702 SSAF 705
>BC001750-1|AAH01750.1| 458|Homo sapiens CEP72 protein protein.
Length = 458
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +1
Query: 271 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 387
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 301 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 343
>BC000132-1|AAH00132.1| 647|Homo sapiens centrosomal protein 72kDa
protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +1
Query: 271 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 387
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 490 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 532
>AK002071-1|BAA92068.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ11209 fis, clone PLACE1007946. ).
Length = 528
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQSTT 456
+EE+ R Q TLD++ +++ N KLR EN LG+ ++ L+ ++ +
Sbjct: 231 REEEERRKEATAHFQITLDEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHI 290
Query: 457 PNIQKK 474
+ K+
Sbjct: 291 DKVFKR 296
>AK001427-1|BAA91685.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ10565 fis, clone NT2RP2002954. ).
Length = 458
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +1
Query: 271 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 387
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 301 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 343
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 79 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 128
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 232 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 281
>X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA)
protein.
Length = 227
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 175 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 224
>M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein.
Length = 229
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 177 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 226
>M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyosin
mRNA, complete cds. ).
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 232 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 281
>M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblast
muscle-type tropomyosin mRNA, complete cds. ).
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 274 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 450
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 861 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 920
Query: 451 TTPNIQKK 474
+K+
Sbjct: 921 LLLEYEKQ 928
>BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AL158199-3|CAI20490.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.8
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +1
Query: 274 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 429
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLETLAAQEAAMK 591
Query: 430 ASSVFQSTTPNIQKK 474
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL138916-4|CAI14698.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.8
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +1
Query: 274 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 429
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLETLAAQEAAMK 591
Query: 430 ASSVFQSTTPNIQKK 474
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta)
isoform 2 variant protein.
Length = 284
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 381
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 423
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 274 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 323
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 274 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 450
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 861 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 920
Query: 451 TTPNIQKK 474
+K+
Sbjct: 921 LLLEYEKQ 928
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 274 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 450
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 913 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 972
Query: 451 TTPNIQKK 474
+K+
Sbjct: 973 LLLEYEKQ 980
>AL158199-2|CAI20489.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +1
Query: 274 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 429
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLEALSAQEAAMK 591
Query: 430 ASSVFQSTTPNIQKK 474
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL138916-3|CAI14697.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.3 bits (65), Expect = 6.4
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +1
Query: 274 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 429
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLEALSAQEAAMK 591
Query: 430 ASSVFQSTTPNIQKK 474
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AB040952-1|BAA96043.1| 648|Homo sapiens KIAA1519 protein protein.
Length = 648
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 271 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 387
++Q++ AR +S+V EL + LDDL Q +D EEN +L+S
Sbjct: 491 EQQQQHAREMSEVTAELHHAHKELDDLRQHLDKSLEENSRLKS 533
>BX004861-1|CAI41713.1| 528|Homo sapiens chromosome X open reading
frame 15 protein.
Length = 528
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLM 426
+EE+ R Q TL+++ +++ N KLR EN LG+ ++ L+
Sbjct: 231 REEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLI 280
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 301 SQVLELQNTLDDLSQRVDSVKE 366
S VLE++N++DDLS R+D ++E
Sbjct: 640 SGVLEIENSVDDLSSRMDILEE 661
>BC101576-1|AAI01577.1| 528|Homo sapiens chromosome X open reading
frame 15 protein.
Length = 528
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLM 426
+EE+ R Q TL+++ +++ N KLR EN LG+ ++ L+
Sbjct: 231 REEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLI 280
>BC101572-1|AAI01573.1| 528|Homo sapiens gamma-taxilin protein.
Length = 528
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLM 426
+EE+ R Q TL+++ +++ N KLR EN LG+ ++ L+
Sbjct: 231 REEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLI 280
>AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.
Length = 1117
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/45 (31%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 271 DEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 402
DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 223 DEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 267
>AY739713-1|AAW65982.1| 396|Homo sapiens CXORF15 protein.
Length = 396
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLM 426
+EE+ R Q TL+++ +++ N KLR EN LG+ ++ L+
Sbjct: 99 REEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLI 148
>AL929302-1|CAI41279.1| 528|Homo sapiens chromosome X open reading
frame 15 protein.
Length = 528
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 277 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLM 426
+EE+ R Q TL+++ +++ N KLR EN LG+ ++ L+
Sbjct: 231 REEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLI 280
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 301 SQVLELQNTLDDLSQRVDSVKE 366
S VLE++N++DDLS R+D ++E
Sbjct: 640 SGVLEIENSVDDLSSRMDILEE 661
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 301 SQVLELQNTLDDLSQRVDSVKE 366
S VLE++N++DDLS R+D ++E
Sbjct: 640 SGVLEIENSVDDLSSRMDILEE 661
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 301 SQVLELQNTLDDLSQRVDSVKE 366
S VLE++N++DDLS R+D ++E
Sbjct: 640 SGVLEIENSVDDLSSRMDILEE 661
>AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein variant
protein.
Length = 939
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/45 (31%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 271 DEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 402
DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 251 DEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 295
>AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein.
Length = 885
Score = 29.9 bits (64), Expect = 8.4
Identities = 14/45 (31%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 271 DEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 402
DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 67 DEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,058,737
Number of Sequences: 237096
Number of extensions: 1611588
Number of successful extensions: 4302
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4282
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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