Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1520
(768 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2DYJ8 Cluster: Zinc finger, C2H2 type family protein; ... 39 0.16
UniRef50_Q93ZB2 Cluster: Ent-kaurene oxidase; n=15; core eudicot... 38 0.36
UniRef50_Q147M4 Cluster: At5g26610; n=20; Magnoliophyta|Rep: At5... 37 0.63
UniRef50_A0DK09 Cluster: Chromosome undetermined scaffold_53, wh... 35 2.6
UniRef50_Q5VUA4 Cluster: Zinc finger protein 318; n=21; Theria|R... 35 2.6
UniRef50_A4KYC4 Cluster: Ribosomal protein S3; n=3; Chrysobalana... 34 3.4
UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1; Tet... 34 4.5
UniRef50_Q6FR68 Cluster: Candida glabrata strain CBS138 chromoso... 34 4.5
UniRef50_P19736 Cluster: Pre-mRNA-splicing factor PRP9; n=2; Sac... 34 4.5
UniRef50_A6DB20 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_A7P407 Cluster: Chromosome chr1 scaffold_5, whole genom... 33 5.9
UniRef50_UPI0000498CE7 Cluster: DNA mismatch repair protein mutS... 33 7.8
UniRef50_A7RI53 Cluster: Predicted protein; n=2; Nematostella ve... 33 7.8
UniRef50_A0CZU1 Cluster: Chromosome undetermined scaffold_32, wh... 33 7.8
>UniRef50_A2DYJ8 Cluster: Zinc finger, C2H2 type family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger, C2H2
type family protein - Trichomonas vaginalis G3
Length = 507
Score = 38.7 bits (86), Expect = 0.16
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +3
Query: 324 RKVKKGFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFERLENGMVLFRNIVITKEAW 503
+K ++ F+CE+CN+ L T + + H T H+R +++EN +V +
Sbjct: 262 KKSQQKFYCEYCNRDLKTEERFKVHQTEKSHLRK-----VQKIENTPGGLEEVVRMRTER 316
Query: 504 NGSLERNALFALLNSMM*RSTLPA 575
N ++E+N+ A+ + +S L A
Sbjct: 317 NRAVEQNSFLAIQLLQILKSVLEA 340
>UniRef50_Q93ZB2 Cluster: Ent-kaurene oxidase; n=15; core
eudicotyledons|Rep: Ent-kaurene oxidase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 509
Score = 37.5 bits (83), Expect = 0.36
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = -3
Query: 499 ASFVITMFLKRTMPFSKRSKR*APLLRICSLPVTWNLPLIIVDRYLLQNSQKNPFLTFLM 320
+SF+ F K+ + FS+++ + + + S+PV P+I LLQ +K P TF
Sbjct: 16 SSFIFIFFFKKLLSFSRKNM--SEVSTLPSVPVVPGFPVI---GNLLQLKEKKPHKTFTR 70
Query: 319 RSSINS---ATKLLASRLFLCSSFEYAVRHLVRLEGKFRRRDSTNAMSLL 179
S I + K+ +S L + +S E A +V R +NA+++L
Sbjct: 71 WSEIYGPIYSIKMGSSSLIVLNSTETAKEAMVTRFSSISTRKLSNALTVL 120
>UniRef50_Q147M4 Cluster: At5g26610; n=20; Magnoliophyta|Rep:
At5g26610 - Arabidopsis thaliana (Mouse-ear cress)
Length = 301
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 261 EEHKKSLEASSFVAEFIEDRIRKVKKGFFCEFCNKYLSTIIKGRFHVTGNEHIRNK 428
EE K E + + I+ +++++K F+CE C+K T+++ H++ +H K
Sbjct: 134 EEIAKKREVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKK 189
>UniRef50_A0DK09 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1335
Score = 34.7 bits (76), Expect = 2.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +3
Query: 246 TAYSKEEHKKSLEASSFVAEFIEDRIRKVKKGFFCEFCNKYLSTIIKGRFHVTGNEHIRN 425
T +EE +SLE + V + + ++ ++KK F CE + Y +K + +G +
Sbjct: 97 TYIQQEEVLESLEVENLVNQSVHMQMEQLKKEFLCEGSDSYFQNEVKSQTQQSGTNKTSS 156
Query: 426 KGAYLFERLENGMVLFRNIVI 488
K +F R+ + +F NI I
Sbjct: 157 K-TVMFLRIIDS--IFGNIKI 174
>UniRef50_Q5VUA4 Cluster: Zinc finger protein 318; n=21; Theria|Rep:
Zinc finger protein 318 - Homo sapiens (Human)
Length = 2099
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 339 GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
GF+C+ C ++L I G HV G++H Y+ E
Sbjct: 955 GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 990
>UniRef50_A4KYC4 Cluster: Ribosomal protein S3; n=3;
Chrysobalanaceae|Rep: Ribosomal protein S3 - Atuna
racemosa
Length = 389
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +3
Query: 138 YLKDGFEVYQERNTNKDIAFVLSRLRNLPSKRTRCRTAYSKEEHKKSLEASSFVAEFIED 317
+L+DG EVY N N + ++R+L S RT T + + +++S +A+ I
Sbjct: 256 FLRDGVEVY--NNNNFSYLKEMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISF 313
Query: 318 RIRKVKKGF 344
++R ++ F
Sbjct: 314 QLRNKRRSF 322
>UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: U1 zinc finger family
protein - Tetrahymena thermophila SB210
Length = 626
Score = 33.9 bits (74), Expect = 4.5
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 264 EHKKSLEASSFVAEFIEDRIR-----KVKKGFFCEFCNKYLS-TIIKGRF-HVTGNEHIR 422
+H+K E + F+ R K+ K F+CE+C YL+ + GR H G +HI
Sbjct: 357 QHEKGTEIGILIKHFVSQLHRCNIPSKMPK-FYCEYCGIYLTHSSPSGRSQHAKGRKHIN 415
Query: 423 NKGAYLFERLEN 458
N+ Y + +E+
Sbjct: 416 NRIEYYKQVIED 427
>UniRef50_Q6FR68 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 223
Score = 33.9 bits (74), Expect = 4.5
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 342 FFCEFCNKYLS--TIIKGRFHVTGNEHIRNKGAY 437
++CE+C+ YL+ T+ +FH+ G H+R + Y
Sbjct: 4 YYCEYCHSYLTHDTLSVRKFHLMGKNHLRVRADY 37
>UniRef50_P19736 Cluster: Pre-mRNA-splicing factor PRP9; n=2;
Saccharomyces cerevisiae|Rep: Pre-mRNA-splicing factor
PRP9 - Saccharomyces cerevisiae (Baker's yeast)
Length = 530
Score = 33.9 bits (74), Expect = 4.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 273 KSLEASSFVAEFIEDRIRKVKKGFFCEFCNKYLSTIIKGRFHVTGNEHIRNK 428
++L S F + +R KG +C FC+++ T H+ G H +N+
Sbjct: 257 ENLIKSDFEHSYCRGSLRSEAKGIYCPFCSRWFKTSSVFESHLVGKIHKKNE 308
>UniRef50_A6DB20 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 323
Score = 33.5 bits (73), Expect = 5.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 168 ERNTNKDIAFVLSRLRNLPSKRTRCRTAYSKEEHKKSLEASSFVAEFIEDRIRKVKKGFF 347
E+N + DIA V R + +K+ +KK ++ +F E + R + FF
Sbjct: 22 EKNIDFDIAIVNYHTRETSDEEVEYAKYLAKKYNKKIFIKDCYLKKFSEKKARDCRYTFF 81
Query: 348 CEFCNKY-LSTIIKG 389
E KY ST+I G
Sbjct: 82 EEIIKKYGYSTLILG 96
>UniRef50_A7P407 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 439
Score = 33.5 bits (73), Expect = 5.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 102 LNRDSLCFICCAYLKDGFEVYQERNTNKDIAFVLSR 209
L+ S CF+CC +L G V ER+ N + A +LSR
Sbjct: 218 LHGTSFCFVCC-HLASGGRVGHERHRNSNAADILSR 252
>UniRef50_UPI0000498CE7 Cluster: DNA mismatch repair protein mutS;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: DNA mismatch
repair protein mutS - Entamoeba histolytica HM-1:IMSS
Length = 911
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 418 ICSLPVTWNLPLII-VDRYLLQNSQKNPFLTFLMRSSINSATKLLA 284
+C++ WNLP I+ L+ + +NP L S+I ++TK+L+
Sbjct: 615 VCNMLFNWNLPSIVNPSDPLILSDARNPILELFTSSAIPNSTKILS 660
>UniRef50_A7RI53 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 503
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 288 SSFVAEFIEDRIRKVKKGFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFERLENGMV 467
S + EF+E +R++ C +C+ L ++KG GN+ +R G L ER + V
Sbjct: 120 SQDLKEFLEQDLRRILVDHSCGYCS-LLPNLLKGFGWNPGNKLLRWFGEQLKERTGDADV 178
Query: 468 LFRNI 482
FR +
Sbjct: 179 TFREV 183
>UniRef50_A0CZU1 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 667
Score = 33.1 bits (72), Expect = 7.8
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 129 CCAYLKDGFEV-YQERNTNKDIAFVLSRLRNLPSKRTRCRTAYSKEEHKKSLEASSFVAE 305
C YL D F + YQ N D+ +L++L + SK + K HK L+A S +
Sbjct: 512 CLNYLLDKFNLKYQALRQNVDLV-ILNKLDRVTSKIEK------KNSHKSLLKAYSIIQY 564
Query: 306 FIEDRIRKVKKGFFCEFCNKYLSTIIKGR 392
FIE I V+ F E + + I KGR
Sbjct: 565 FIEQNI-CVQHLKFVEQMSVLIRKIEKGR 592
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,363,226
Number of Sequences: 1657284
Number of extensions: 14199442
Number of successful extensions: 40025
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40012
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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