Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1520
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    24   1.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   2.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.2  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 471 FRNIVITKEAWNGSLERNALFA 536
           ++N VI K  W G L  +ALFA
Sbjct: 183 WQNKVIQKFLWTGGLVTSALFA 204


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 471 FRNIVITKEAWNGSLERNALFA 536
           ++N VI K  W G L  +ALFA
Sbjct: 416 WQNKVIQKFLWTGGLVTSALFA 437


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 471 FRNIVITKEAWNGSLERNALFA 536
           ++N VI K  W G L  +ALFA
Sbjct: 416 WQNKVIQKFLWTGGLVTSALFA 437


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 289 LASRLFLCSSFEYAVRHLV 233
           L  RLF  S  EY  RHL+
Sbjct: 240 LCERLFEASREEYVTRHLI 258


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 391 LPLIIVDRYLLQNSQKNPFLTFLMRSSINSATKLLASRLFLCSSF 257
           L LII+   +++ +QK+  LT+ MR    +AT      L+  S+F
Sbjct: 268 LSLIILCDCVVKEAQKSLVLTYEMRWYCQTATMEEKQELYEFSNF 312


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 497 FFRDNNVSKENHAILQTLEEIGALIT 420
           F+RD     + H IL  L +I +LIT
Sbjct: 118 FYRDEPRFSQPHQILTLLMDIDSLIT 143


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 497 FFRDNNVSKENHAILQTLEEIGALIT 420
           F+RD     + H IL  L +I +LIT
Sbjct: 278 FYRDEPRFSQPHQILTLLMDIDSLIT 303


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 497 FFRDNNVSKENHAILQTLEEIGALIT 420
           F+RD     + H IL  L +I +LIT
Sbjct: 278 FYRDEPRFSQPHQILTLLMDIDSLIT 303


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 327 KVKKGFFCEFCNK 365
           K K+ F C++CN+
Sbjct: 75  KPKRQFICKYCNR 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,510
Number of Sequences: 336
Number of extensions: 3888
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)