Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1520
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098434-1|AAH98434.1| 1041|Homo sapiens ZNF318 protein protein.       35   0.37 
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318...    35   0.37 
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318...    35   0.37 
AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator pro...    35   0.37 
AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein.              35   0.37 
AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AK127627-1|BAC87063.1|  662|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AK098782-1|BAC05412.1|  583|Homo sapiens protein ( Homo sapiens ...    30   7.9  

>BC098434-1|AAH98434.1| 1041|Homo sapiens ZNF318 protein protein.
          Length = 1041

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 339  GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
            GF+C+ C ++L   I G  HV G++H      Y+ E
Sbjct: 955  GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 990


>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
            protein.
          Length = 2279

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 339  GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
            GF+C+ C ++L   I G  HV G++H      Y+ E
Sbjct: 1135 GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 1170


>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
            protein.
          Length = 2279

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 339  GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
            GF+C+ C ++L   I G  HV G++H      Y+ E
Sbjct: 1135 GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 1170


>AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator protein.
          Length = 2099

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 339  GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
            GF+C+ C ++L   I G  HV G++H      Y+ E
Sbjct: 955  GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 990


>AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein.
          Length = 2099

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 339  GFFCEFCNKYLSTIIKGRFHVTGNEHIRNKGAYLFE 446
            GF+C+ C ++L   I G  HV G++H      Y+ E
Sbjct: 955  GFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDE 990


>AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31033 fis, clone HSYRA1000168, weakly similar to
           HYPOTHETICAL HELICASE C28H8.3 IN CHROMOSOME III. ).
          Length = 729

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 479 HCYHERSMEWIIGKKCIICAIEFNDVKKHITSVKH 583
           H Y  +S E     + ++C   +ND++KHI SVKH
Sbjct: 508 HSYKNQSYE----VRLVLCGERYNDLEKHICSVKH 538


>AK127627-1|BAC87063.1|  662|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45725 fis, clone HCHON2009766. ).
          Length = 662

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 615 NCTSNF-NILKMCLTLVMCFFTSLNSIAQIMHFFPMIHSMLL 493
           NC   F N       L  CF  S+N I Q M F+ MIH+  L
Sbjct: 176 NCAKYFINYFFYKFGLETCFLMSVNVIGQRMDFYAMIHACWL 217


>AK098782-1|BAC05412.1|  583|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25916 fis, clone CBR04903. ).
          Length = 583

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 615 NCTSNF-NILKMCLTLVMCFFTSLNSIAQIMHFFPMIHSMLL 493
           NC   F N       L  CF  S+N I Q M F+ MIH+  L
Sbjct: 397 NCAKYFINYFFYKFGLETCFLMSVNVIGQRMDFYAMIHACWL 438


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,906,493
Number of Sequences: 237096
Number of extensions: 2065866
Number of successful extensions: 6294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6294
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)