Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1519
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid t... 97 3e-20
S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate aminotran... 97 3e-20
BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate aminotr... 97 3e-20
BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate aminotr... 96 1e-19
L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate aminotran... 89 8e-18
AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate amin... 36 0.14
AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate a... 36 0.14
AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate amin... 33 0.58
AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate amin... 33 0.58
DQ205185-1|ABA27098.1| 606|Homo sapiens scavenger receptor clas... 32 1.3
BC075068-1|AAH75068.1| 606|Homo sapiens scavenger receptor clas... 32 1.3
BC075067-1|AAH75067.1| 606|Homo sapiens scavenger receptor clas... 32 1.3
BC060811-1|AAH60811.1| 466|Homo sapiens scavenger receptor clas... 32 1.3
AB007830-1|BAA86202.1| 466|Homo sapiens CSR2 protein. 32 1.3
AB007829-1|BAA86201.1| 606|Homo sapiens CSR1 protein. 32 1.3
BC110598-1|AAI10599.1| 232|Homo sapiens potassium channel tetra... 31 4.1
BC019929-1|AAH19929.2| 232|Homo sapiens potassium channel tetra... 31 4.1
AY646650-1|AAT75307.1| 232|Homo sapiens potassium channel tetra... 31 4.1
AK126920-1|BAC86751.1| 398|Homo sapiens protein ( Homo sapiens ... 29 9.5
>U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid
transaminase protein.
Length = 500
Score = 97.5 bits (232), Expect = 3e-20
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +1
Query: 256 QQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
Q+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL
Sbjct: 56 QELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKL 115
Query: 436 FEDQHNLKSLINRPALGVFPSADWQRN*KMCYYLLDPLG 552
+ N +NRPALG+ P ++ + + P G
Sbjct: 116 IQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKG 154
>S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 450
Score = 97.5 bits (232), Expect = 3e-20
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +1
Query: 256 QQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
Q+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL
Sbjct: 21 QELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKL 80
Query: 436 FEDQHNLKSLINRPALGVFPSADWQRN*KMCYYLLDPLG 552
+ N +NRPALG+ P ++ + + P G
Sbjct: 81 IQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKG 119
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL+ LLSV P G+ + TM CGSCS E
Sbjct: 106 EKLRQSLLSVAPKGMSQLITMACGSCSNE 134
>BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 97.5 bits (232), Expect = 3e-20
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +1
Query: 256 QQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
Q+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL
Sbjct: 56 QELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKL 115
Query: 436 FEDQHNLKSLINRPALGVFPSADWQRN*KMCYYLLDPLG 552
+ N +NRPALG+ P ++ + + P G
Sbjct: 116 IQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKG 154
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL+ LLSV P G+ + TM CGSCS E
Sbjct: 141 EKLRQSLLSVAPKGMSQLITMACGSCSNE 169
>BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 95.9 bits (228), Expect = 1e-19
Identities = 41/99 (41%), Positives = 61/99 (61%)
Frame = +1
Query: 256 QQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
++L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QISS+P+GY+HP LL
Sbjct: 56 RELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKL 115
Query: 436 FEDQHNLKSLINRPALGVFPSADWQRN*KMCYYLLDPLG 552
+ N +NRPALG+ P ++ + + P G
Sbjct: 116 IQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKG 154
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL+ LLSV P G+ + TM CGSCS E
Sbjct: 141 EKLRQSLLSVAPKGMSQLITMACGSCSNE 169
>L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 89.4 bits (212), Expect = 8e-18
Identities = 39/99 (39%), Positives = 59/99 (59%)
Frame = +1
Query: 256 QQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
Q+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QISS+P+GY+ P L+
Sbjct: 56 QELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSDPALVKL 115
Query: 436 FEDQHNLKSLINRPALGVFPSADWQRN*KMCYYLLDPLG 552
+ N +NRPAL + P ++ + + P G
Sbjct: 116 IQQPQNASMFVNRPALEILPPENFVEKLRQSLLSVAPKG 154
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL+ LLSV P G+ + TM CGSCS E
Sbjct: 141 EKLRQSLLSVAPKGMSQLITMACGSCSNE 169
>AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.14
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 83 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 118
>AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate
aminotransferase protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.14
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.58
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 protein.
Length = 514
Score = 33.5 bits (73), Expect = 0.58
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ 130
>DQ205185-1|ABA27098.1| 606|Homo sapiens scavenger receptor class
A, member 3 protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>BC075068-1|AAH75068.1| 606|Homo sapiens scavenger receptor class
A, member 3 protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>BC075067-1|AAH75067.1| 606|Homo sapiens scavenger receptor class
A, member 3 protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>BC060811-1|AAH60811.1| 466|Homo sapiens scavenger receptor class
A, member 3 protein.
Length = 466
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>AB007830-1|BAA86202.1| 466|Homo sapiens CSR2 protein.
Length = 466
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>AB007829-1|BAA86201.1| 606|Homo sapiens CSR1 protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 212 PDKPNIQTAIPGPKCSSC*KNSTLY-SKREQFSFLLIMTKVLEIIS 346
P P Q PGP+CS C KN +L+ S R + FL ++ + +++
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73
>BC110598-1|AAI10599.1| 232|Homo sapiens potassium channel
tetramerisation domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 334 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 471
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
>BC019929-1|AAH19929.2| 232|Homo sapiens potassium channel
tetramerisation domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 334 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 471
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
>AY646650-1|AAT75307.1| 232|Homo sapiens potassium channel
tetramerization domain containing 11 protein.
Length = 232
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 334 GNYFFDADGNAF--LDAFTQIS--SLPVGYNHPELLSAFEDQHNLKSLIN 471
G+YF D DG AF + F ++ LP GY LL A D + ++ L++
Sbjct: 22 GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
>AK126920-1|BAC86751.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44972 fis, clone BRAWH3001053. ).
Length = 398
Score = 29.5 bits (63), Expect = 9.5
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +3
Query: 6 VPYLIVGSNKIFAAYLGTYLIINLI*RYSRI*KSDPQNS*F*VSKCCYELQEVLTFLEVL 185
+P IVG + + LG Y IIN + R+ + DP ELQ + ++ E+
Sbjct: 227 LPDCIVGEDGLILTPLGRYQIINGLRRFEIEYQGDP------------ELQPIRSY-EIA 273
Query: 186 GLIRFCSMNQINPIFKQRFPGPSAAAAER 272
GL+R ++ +++ RF G AA R
Sbjct: 274 GLVR--TLFRLSSAINHRFAGQMAALCSR 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,567,877
Number of Sequences: 237096
Number of extensions: 1613270
Number of successful extensions: 3421
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3420
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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