Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1519
(596 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3265|AAN11644.1| 486|Drosophila melanogaster CG7433-PB... 122 4e-28
AE014296-3264|AAF49081.1| 486|Drosophila melanogaster CG7433-PA... 122 4e-28
AY113591-1|AAM29596.1| 486|Drosophila melanogaster RH42429p pro... 121 6e-28
AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p pro... 31 0.90
AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA... 31 0.90
AY058552-1|AAL13781.1| 508|Drosophila melanogaster LD24726p pro... 31 1.2
AE014296-3711|AAF51855.3| 508|Drosophila melanogaster CG11241-P... 31 1.2
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro... 30 2.7
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P... 30 2.7
>AE014296-3265|AAN11644.1| 486|Drosophila melanogaster CG7433-PB,
isoform B protein.
Length = 486
Score = 122 bits (294), Expect = 4e-28
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +1
Query: 259 QLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAF 438
+L K+L+++Q G +Q FADY+KSIGNY +D DGN LD +TQISS+P+GYNHP L F
Sbjct: 45 ELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVF 104
Query: 439 EDQHNLKSLINRPALGVFPSADW 507
++ NLK+LINRPALGVFP +W
Sbjct: 105 NNEQNLKTLINRPALGVFPGKEW 127
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL +VLL++ P GL+ I TMMCGSCS E
Sbjct: 129 EKLHSVLLNIAPKGLNKITTMMCGSCSNE 157
>AE014296-3264|AAF49081.1| 486|Drosophila melanogaster CG7433-PA,
isoform A protein.
Length = 486
Score = 122 bits (294), Expect = 4e-28
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +1
Query: 259 QLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAF 438
+L K+L+++Q G +Q FADY+KSIGNY +D DGN LD +TQISS+P+GYNHP L F
Sbjct: 45 ELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVF 104
Query: 439 EDQHNLKSLINRPALGVFPSADW 507
++ NLK+LINRPALGVFP +W
Sbjct: 105 NNEQNLKTLINRPALGVFPGKEW 127
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 510 EKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
EKL +VLL++ P GL+ I TMMCGSCS E
Sbjct: 129 EKLHSVLLNIAPKGLNKITTMMCGSCSNE 157
>AY113591-1|AAM29596.1| 486|Drosophila melanogaster RH42429p
protein.
Length = 486
Score = 121 bits (292), Expect = 6e-28
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +1
Query: 259 QLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAF 438
+L K+L+++Q G +Q FADY+KSIGNY +D DGN LD +TQISS+P+GYNHP L F
Sbjct: 45 ELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVF 104
Query: 439 EDQHNLKSLINRPALGVFPSADW 507
++ N+K+LINRPALGVFP +W
Sbjct: 105 NNEQNMKTLINRPALGVFPGKEW 127
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 513 KLKNVLLSVGPVGLDNIATMMCGSCSIE 596
KL +VLL++ P GL+ I TMMCGSCS E
Sbjct: 130 KLHSVLLNIAPKGLNKITTMMCGSCSNE 157
>AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p
protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 334 GNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
G Y FD +G +LD ++ VG+ HPE++ A
Sbjct: 49 GQYMFDEEGTRYLDCINNVAH--VGHCHPEVVRA 80
>AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA
protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 334 GNYFFDADGNAFLDAFTQISSLPVGYNHPELLSA 435
G Y FD +G +LD ++ VG+ HPE++ A
Sbjct: 49 GQYMFDEEGTRYLDCINNVAH--VGHCHPEVVRA 80
>AY058552-1|AAL13781.1| 508|Drosophila melanogaster LD24726p
protein.
Length = 508
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ +D +G +LD F I ++ VG+ HP++ A +Q
Sbjct: 90 WLYDHEGRRYLDMFGGIVTVSVGHCHPKVNQALSEQ 125
>AE014296-3711|AAF51855.3| 508|Drosophila melanogaster CG11241-PA
protein.
Length = 508
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 340 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
+ +D +G +LD F I ++ VG+ HP++ A +Q
Sbjct: 90 WLYDHEGRRYLDMFGGIVTVSVGHCHPKVNQALSEQ 125
>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p
protein.
Length = 1767
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 397 VKIFV*KHLGMHYHRRQRNNFQ 332
V+ FV + LG+HYHRR R N +
Sbjct: 652 VREFVHQKLGLHYHRRLRKNLK 673
>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
protein.
Length = 1767
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 397 VKIFV*KHLGMHYHRRQRNNFQ 332
V+ FV + LG+HYHRR R N +
Sbjct: 652 VREFVHQKLGLHYHRRLRKNLK 673
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,042,110
Number of Sequences: 53049
Number of extensions: 502936
Number of successful extensions: 1792
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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