Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1519
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    99   1e-21
U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    35   0.038
Z34802-1|CAA84336.1|  531|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z81099-2|CAB03188.2|  297|Caenorhabditis elegans Hypothetical pr...    31   0.47 
AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical...    31   0.82 
Z81116-7|CAB03306.1|  669|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC006795-1|AAF59492.2|  435|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score =   99 bits (238), Expect = 1e-21
 Identities = 43/82 (52%), Positives = 58/82 (70%)
 Frame = +1

Query: 262 LLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFE 441
           L +E++ + Q  +V+   DY+KS GNY  DADGNA LD +TQISSLP+GYNHP+L+    
Sbjct: 42  LKQEMDKVHQTTSVRFHVDYEKSFGNYVVDADGNALLDVYTQISSLPLGYNHPDLVKVAS 101

Query: 442 DQHNLKSLINRPALGVFPSADW 507
             H + SL++RPALG FP  D+
Sbjct: 102 QPHLITSLVSRPALGSFPRTDF 123



 Score = 31.1 bits (67), Expect = 0.62
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query: 140 MLLRTSRSAHVFRGVRAYSVLQH-EPDKPNIQTAIPGPK 253
           ML R ++S+ + + VR  S + + EP  P+I T+IPGPK
Sbjct: 1   MLPRLAKSS-LIQQVRGVSAIANAEPSGPSISTSIPGPK 38



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 507 AEKLKNVLLSVGPVGLDNIATMMCGSCSIE 596
           A+ + + L S+ P GL  + TM+CG+ + E
Sbjct: 124 ADGISHALTSIAPKGLKAVQTMLCGTSANE 153


>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 259 QLLKELNTLQQAGAVQLFADY---DKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELL 429
           Q ++ L  L   G V  + D     K    + FD++G  +LD F  I ++ VG+ HP++ 
Sbjct: 2   QRVQALRPLLPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKIN 61

Query: 430 SAFEDQ 447
           +A  +Q
Sbjct: 62  AALTEQ 67


>Z34802-1|CAA84336.1|  531|Caenorhabditis elegans Hypothetical
           protein M88.1 protein.
          Length = 531

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +2

Query: 50  LRYLPNYKFDLEVQQNLEVRSTKFLILSI-KMLLRTSRSAHVFR 178
           L +LP+YK D+++ +N++V   +  +  + K LL   +SA +F+
Sbjct: 53  LSHLPDYKTDVKIPKNIKVHRVEAYVEGLTKALLEKEQSAFIFK 96


>Z81099-2|CAB03188.2|  297|Caenorhabditis elegans Hypothetical
           protein K08F9.3 protein.
          Length = 297

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
 Frame = +1

Query: 226 YSNSDSRAQVQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPV 405
           + NS    +  +  K+L        + +   ++K  G+   D    +F++ + Q+  + +
Sbjct: 147 FENSHKEQEFLECRKKLGESNSTAKIMIAMGFNK--GSCKIDCI-TSFIEKY-QVDGVEL 202

Query: 406 GYNHPE-LLSAFEDQHNLKSLI----NRPALGVFPSADWQR 513
            +NH E  LS  E   NLK+ +    N   LGV  S++W R
Sbjct: 203 HWNHNEHFLSQLETTRNLKNRLKKISNSKLLGVSASSNWSR 243


>AC084197-25|AAK68591.1|  609|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.19 protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 319 YDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQ 447
           YD+  G YFFD D + F    T   +  + Y   E L A++++
Sbjct: 81  YDEDTGEYFFDRDPDIFRHILTFYRTGKLHYPRHECLVAYDEE 123


>Z81116-7|CAB03306.1|  669|Caenorhabditis elegans Hypothetical
           protein T06C12.8 protein.
          Length = 669

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 229 SNSDSRAQVQQLLKELN-TLQQAGAVQLFADYDKSIGNY-FFDADGNAFLDAFTQISSL 399
           SNS SR +  QL K+     +      +F  Y+ S G Y FFD +G ++L  F+Q++ L
Sbjct: 544 SNSLSRKRYAQLEKDCGGKCELVDYKSVF--YNISTGTYRFFDTNGFSYLSVFSQLTPL 600


>U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical
           protein C01B10.9 protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 298 AVQLFADYDKSIGNYFFDADGNAFLDAF 381
           A  LF +    +GNYFFDAD     D F
Sbjct: 76  ATGLFEEEHGIVGNYFFDADTKKAFDYF 103


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 355 DGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLI 468
           D  A    FTQ+ ++P   +  E + A E  +NLKSL+
Sbjct: 459 DTAALQSLFTQLKAMPSQSDDSESIKAIEKLNNLKSLL 496


>AC006795-1|AAF59492.2|  435|Caenorhabditis elegans Hypothetical
           protein Y50D4B.7 protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 479 LWEFFLQLIGREIEKCVI 532
           LWEF L+++G+ IEK VI
Sbjct: 313 LWEFGLKVVGKSIEKIVI 330


>Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical
           protein D1081.4 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 147 NNILILRIKNFVDRTSRFCCTSKSNL 70
           N++ +L + N  D+    CC SKSN+
Sbjct: 126 NSVPVLLVANKTDKPCLSCCASKSNM 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,607
Number of Sequences: 27780
Number of extensions: 263540
Number of successful extensions: 667
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)