Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1519
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.43
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.43
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.43
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 0.56
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 1.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 1.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 1.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 1.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 1.7
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 23 3.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 4.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 4.0
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 22 5.3
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 6.9
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.2
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.43
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSANQLKEKLPELAY 470
+EP II + LSN T +NN +N++ N +L Y
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.43
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSANQLKEKLPELAY 470
+EP II + LSN T +NN +N++ N +L Y
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.43
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSANQLKEKLPELAY 470
+EP II + LSN T +NN +N++ N +L Y
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 25.0 bits (52), Expect = 0.56
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSANQLKEKLPELAY 470
+EP II + LSN T +NN +N++ N +L Y
Sbjct: 77 REPKII-SSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPV 116
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 403 REVKIFV*KHLGMHYHRRQRNNFQYFCHNQQKAELLPLAV 284
+E KI +Y NN++ C+N E +P+ V
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 198 FCSMNQINPIFKQRFPGPSAAAAE 269
FC N INP F P S A+
Sbjct: 48 FCGPNVINPFFCDMSPSLSLLCAD 71
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSAN 503
+EP II + LSN T +NN +N++ N
Sbjct: 77 REPKII-SSLSNKTIHNNNNYKYNYNNN 103
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 586 QEPHIIVAMLSNPTGPTDNNTFFNFSAN 503
+EP II + LSN T +NN +N++ N
Sbjct: 310 REPKII-SSLSNKTIHNNNNYKYNYNNN 336
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 561 CCPTQRVQQIITHFSIS 511
CCP I+ FSIS
Sbjct: 233 CCPNDTYPMIVYEFSIS 249
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 421 ELLSAFEDQHNLKSLIN-RPALGVFPSAD 504
E+ +AF +NLK L+N G PS D
Sbjct: 272 EISNAFRGNNNLKWLVNWGEQWGFLPSKD 300
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 270 FQQLLHLGPGIAV*ILGLS 214
F+ +HLG G+AV GL+
Sbjct: 88 FKGFVHLGAGLAVGFSGLA 106
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 198 FCSMNQINPIFKQRFPGPSAAAAE 269
FC N INP F P S A+
Sbjct: 47 FCGPNVINPFFCDMSPLLSLVCAD 70
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 239 SLFEYWVYLVHAAKPNKP 186
S+ + +V VHA KP KP
Sbjct: 236 SMAKSFVRKVHATKPPKP 253
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,139
Number of Sequences: 438
Number of extensions: 3434
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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