Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1518
(752 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 92 4e-19
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 89 4e-18
SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08) 87 1e-17
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 87 1e-17
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 86 3e-17
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 86 3e-17
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42) 81 7e-16
SB_1654| Best HMM Match : ABC_tran (HMM E-Value=1.2) 80 2e-15
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 77 1e-14
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 76 4e-14
SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17) 76 4e-14
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 75 6e-14
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 74 1e-13
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38) 68 7e-12
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 64 2e-10
SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0) 63 2e-10
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 56 3e-08
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 55 7e-08
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 50 2e-06
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 44 2e-04
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3) 38 0.007
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 37 0.020
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 37 0.020
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 33 0.25
SB_49476| Best HMM Match : ABC_tran (HMM E-Value=0.00018) 33 0.33
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_27186| Best HMM Match : ABC_tran (HMM E-Value=0.76) 31 0.76
SB_51554| Best HMM Match : ABC_tran (HMM E-Value=0.76) 31 0.76
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 30 1.8
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 30 2.3
SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9) 29 3.1
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.1
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52) 28 7.1
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) 28 7.1
SB_30104| Best HMM Match : Exo_endo_phos (HMM E-Value=0.042) 28 7.1
SB_6987| Best HMM Match : RVT_1 (HMM E-Value=2.2e-21) 28 7.1
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 28 9.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+A GGSNFS G+ DEATANVD +TD+LIQ++IR F DCTV+
Sbjct: 1017 LAEGGSNFSVGQRQLVCLARAILSHNKILVIDEATANVDHSTDSLIQETIRNKFHDCTVL 1076
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHRL+TV DSDRV+V++AG++V+
Sbjct: 1077 TIAHRLNTVMDSDRVMVLDAGRLVE 1101
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 264 PYELLKNDNGHFSKMVKQLGPASEQSLRELARDAH 368
PY LL N G FS++V+Q G + +LRE AR A+
Sbjct: 1105 PYVLLLNSQGFFSQLVEQTGEKTAANLRESARQAY 1139
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GGSNFS G+ DEATANVDP TD +IQ +IR F DCTV+
Sbjct: 1595 IQEGGSNFSVGERQLFSLARALLHKNKIIVMDEATANVDPQTDHMIQTTIRDKFKDCTVL 1654
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
T+AHRL T+ D DR++V+ GQ+V++ T
Sbjct: 1655 TIAHRLSTIMDCDRIMVLHDGQVVEMGT 1682
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 133 LIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRT 285
+ Q+ I + D + V H L + +D+VV+ME G+IV + Y+ T
Sbjct: 943 VFQRCICELLRDKLCILVTHDLGCIEKADKVVIMEGGKIVKQSIYKEYIDT 993
>SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08)
Length = 435
Score = 87.4 bits (207), Expect = 1e-17
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+A GSNFS G+ DEATANVD +TD+LI+++IR F DCTV+
Sbjct: 48 LAEKGSNFSVGQRQLVCLARAILSHNKILVIDEATANVDHSTDSLIKETIRNKFHDCTVL 107
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHRL+TV DSDRV+V++AG++V+
Sbjct: 108 TIAHRLNTVMDSDRVMVLDAGRLVE 132
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 264 PYELLKNDNGHFSKMVKQLGPASEQSLRELARDAH 368
PY LL N G FS++V+Q G + SLRE AR A+
Sbjct: 136 PYVLLLNSQGFFSQLVEQTGEKTASSLRESARQAY 170
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+A GSNFS G+ DEATANVDP TDALIQ++IR F DCTV+
Sbjct: 164 LAEAGSNFSVGQRQLVCLARAILRHSRILVIDEATANVDPRTDALIQETIRDKFQDCTVL 223
Query: 181 TVAHRLHTVADSDRVVV 231
T+AHRLHT+ DSDRV++
Sbjct: 224 TIAHRLHTIMDSDRVMI 240
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 264 PYELLKNDNGHFSKMVKQLGPASEQSLRELARDAHAQHIQYVDADDQDKT 413
PY+LLK N FS +V+Q G + L ++A+ + ++ + + + ++
Sbjct: 345 PYKLLKKRNTIFSGLVEQTGGTEAKRLFDIAQQTFYKQMEALKEESEGRS 394
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 86.2 bits (204), Expect = 3e-17
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG+NFS G+ DEATANVDP TD LIQ +IR F DCTV+
Sbjct: 248 IQEGGANFSVGERQLFSLARALLHKKKIIVMDEATANVDPQTDHLIQTTIRDKFKDCTVL 307
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
+AHRL T+ D DR++V+ GQ+V++ T
Sbjct: 308 IIAHRLSTIMDCDRIMVLHDGQVVEMGT 335
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
V GG+NFSAG+ DEATANVD NTD LIQ +IR+ F DCTV+
Sbjct: 1176 VKEGGANFSAGEMQLFCMARALLHKNKIIVMDEATANVDQNTDRLIQTTIREKFQDCTVL 1235
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
+AHRL T+ D DR++V++ G++V+ T
Sbjct: 1236 IIAHRLSTILDCDRIMVVDDGRVVEFDT 1263
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +1
Query: 13 GSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVVTVAH 192
GSN SAG+ DEATANVD TDALIQ++IR F CTV+T+AH
Sbjct: 1143 GSNLSAGERQLLCLARAMLQRNNIIVLDEATANVDFKTDALIQETIRTKFKGCTVITIAH 1202
Query: 193 RLHTVADSDRVVVMEAGQIVDVATLTSYLRTITGISR 303
RL+T+ D D+++V+E G++ + T + G+ R
Sbjct: 1203 RLNTIMDYDKILVLERGRVAEYGTPQELMEMPDGVFR 1239
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 166 DCTVVTVAHRLHTVADSDRVVVMEAGQI 249
D T V V H+L + +D VVVM AG +
Sbjct: 587 DKTRVLVTHQLQYLKGADHVVVMNAGSV 614
>SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42)
Length = 347
Score = 81.4 bits (192), Expect = 7e-16
Identities = 38/88 (43%), Positives = 51/88 (57%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG N S G+ DEATANVDP TD +IQ +IR F DCTV+
Sbjct: 240 IEEGGVNLSVGERQLFSLARALLQKNKIIVMDEATANVDPKTDKMIQTTIRDKFKDCTVL 299
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
+AHRL T+ D DR++V+ GQ+V++ T
Sbjct: 300 IIAHRLSTIMDCDRIMVLHNGQVVEMDT 327
>SB_1654| Best HMM Match : ABC_tran (HMM E-Value=1.2)
Length = 94
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVAT 264
DEATANVDP TD +IQ +IR F DCTV+T+AHRL T+ D DR++V+ GQ+V++ T
Sbjct: 18 DEATANVDPQTDHMIQTTIRDKFKDCTVLTIAHRLSTIMDCDRIMVLHDGQVVEMGT 74
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG N S G+ DE TANVDP TD +IQ +IR F DCTV+
Sbjct: 1009 IEEGGVNLSVGERQLFSLARALLQKNKIIIMDEVTANVDPQTDKMIQTTIRDKFKDCTVL 1068
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
+AHRL T+ D DR++V+ GQ+V++ T
Sbjct: 1069 IIAHRLSTIMDCDRIMVLHDGQVVEMDT 1096
>SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/106 (37%), Positives = 59/106 (55%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
++ G+NF G+ DEATANVD NTD IQ++IR F+ CTV+
Sbjct: 361 LSESGNNFGVGERQLLCLARALLNKNKIIVMDEATANVDFNTDRSIQETIRSKFSGCTVI 420
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITGISRKWLNN 318
T+AHRL+T+ D D+V+VME GQ ++ + L+ G+ + N
Sbjct: 421 TIAHRLNTILDYDKVLVMEKGQAMEFDSPDELLKRGDGMLTELFRN 466
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GS FS G+ DEATANVD TD L+Q+ IR FAD TV+
Sbjct: 1154 LGESGSGFSVGERQLLCLARALLQNTKLIVLDEATANVDYRTDRLVQQVIRDMFADVTVL 1213
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHR++T+ D D+VVVM+AG +V+
Sbjct: 1214 TIAHRVNTIMDYDKVVVMDAGHVVE 1238
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG+ S G+ DEATANVD TD L+Q+ IR F+DCTV+
Sbjct: 190 LGEGGAGLSMGEKQLLCLARALLQKCKVLILDEATANVDYRTDRLVQQVIRDRFSDCTVL 249
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHR++T+ D VVVME G +VD
Sbjct: 250 TIAHRINTIMDYASVVVMEHGHVVD 274
>SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17)
Length = 398
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
V G+NFS G+ DEATA+VD TD LIQK+IR F DCTV+
Sbjct: 262 VTESGNNFSVGQRQLICLARALLRRNVILIIDEATAHVDQRTDVLIQKTIRSKFKDCTVL 321
Query: 181 TVAHRLHTVADSDRVVVM 234
T+AHRL+T+ D DRV+++
Sbjct: 322 TIAHRLNTIMDMDRVMLL 339
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GS FS G+ DEATANVD TD L+Q+ IR+ FAD TV+
Sbjct: 1204 LGESGSGFSVGERQLLCLARAALQKCKLLVLDEATANVDYRTDRLVQQVIREKFADVTVL 1263
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHR++T+ D +VVVM+AG +V+
Sbjct: 1264 TIAHRVNTIMDYGKVVVMDAGHVVE 1288
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GS FS G+ DEATANVD TD L+Q+ IR FAD TV+
Sbjct: 1124 LGESGSGFSVGERQLLCLARALLQKSKLLVLDEATANVDYRTDRLVQQVIRDKFADVTVL 1183
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHR++T+ D D+VVV++ G++V+
Sbjct: 1184 TIAHRVNTIMDYDKVVVIDTGRVVE 1208
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GS FS G+ DEATANVD TD +Q+ IR F CTV+
Sbjct: 1197 LGESGSTFSVGERQLLCLARALLQRCKVLVLDEATANVDYRTDRQVQQLIRSRFTGCTVL 1256
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
T+AHRL+T+ D D+V+V++ G +V+ T
Sbjct: 1257 TIAHRLNTIMDYDKVIVLDKGHVVEYDT 1284
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GS FS G+ DEATANVD TD +Q+ IR F CTV+
Sbjct: 962 LGESGSTFSVGERQLLCLARALLQRCKVLVLDEATANVDYRTDRQVQQLIRSRFTGCTVL 1021
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVAT 264
T+AHRL+T+ D D+V+V++ G +V+ T
Sbjct: 1022 TIAHRLNTIMDYDKVIVLDKGHVVEYDT 1049
>SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38)
Length = 283
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG N S G+ DEAT NVDP TD +IQ +IR F DCTV+
Sbjct: 183 IEEGGVNLSVGERQLFSLARALLQKNKIIVMDEATTNVDPQTDQMIQTTIRDKFKDCTVL 242
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITG 294
+AHRL T+ DR++ + G+ +A+ T T+ G
Sbjct: 243 IIAHRLGTIMGCDRIICTD-GKRRQLASTTMATFTLMG 279
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+A GG N S G+ DEATA VD TD LIQ +IR FA+ TV
Sbjct: 1462 IAEGGENLSVGQRQLVCLARALLRKSKVLVLDEATAAVDLETDELIQNTIRTEFAERTVF 1521
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVD 255
T+AHRL+T+ D R++V++ G +++
Sbjct: 1522 TIAHRLNTIMDYSRILVLDKGFMME 1546
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTS 273
DEAT+ VD TD L+Q+ IR F + T++TV HRL T+ D DRV+V++ G+IV+ +
Sbjct: 226 DEATSVVDYKTDRLVQEIIRSKFKNSTIITVPHRLSTIIDYDRVMVLDNGRIVEFDKPET 285
Query: 274 YLRTITGI 297
L+ GI
Sbjct: 286 LLKKSDGI 293
>SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 672
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+ GG N SAG+ DEATA VD TD LIQ +IR FAD TV+
Sbjct: 551 IQEGGENLSAGQCQLVCLARALLRKSKVLVLDEATAAVDLETDELIQNTIRTEFADRTVL 610
Query: 181 TVAH---------RLHTVADSDRVVVMEAGQIVDVATLTSYL 279
T+AH RL+T+ D R++V++ G I++ T ++ L
Sbjct: 611 TIAHRLNTIMDYTRLNTIVDYTRIMVLDEGSILEFDTPSALL 652
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/81 (41%), Positives = 43/81 (53%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
+A GG N S G+ DEATA VD TD LIQ +IR FA+ TV+
Sbjct: 1031 IAEGGENLSVGQRQLVCLARALLRKSKVLVLDEATAAVDLETDELIQNTIRTEFAERTVL 1090
Query: 181 TVAHRLHTVADSDRVVVMEAG 243
T+AHRL+T+ D R V+ G
Sbjct: 1091 TIAHRLNTIMDYTRARVLIDG 1111
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTS 273
DEAT+ +D ++ L+Q+++ + TV+T+AHRL T+ ++D +VV++ G IV+ + +
Sbjct: 1214 DEATSALDSESEHLVQEALERLMKGRTVITIAHRLSTIKNADNIVVLDGGSIVESGSYSQ 1273
Query: 274 YLRTITGISRK 306
+ G+ RK
Sbjct: 1274 LMEEPDGLFRK 1284
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1
Query: 130 ALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQI 249
A IQ +IR F DCTV+T+AHRL+TV +DR++VMEAG++
Sbjct: 2 AKIQDTIRDAFVDCTVLTIAHRLNTVLTADRIMVMEAGKV 41
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +1
Query: 13 GSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVVTVAH 192
GSN S G+ DE TA+VDP T IQ+++R+ +CT+VT+AH
Sbjct: 1104 GSNLSLGERQLICLARVLLRKNRILILDEPTAHVDPLTTEKIQQALREELCECTIVTIAH 1163
Query: 193 RLHTVADSDRVVVMEAGQI 249
++ DRV+ M G+I
Sbjct: 1164 LPTSLTVCDRVLTMREGRI 1182
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 54.4 bits (125), Expect = 9e-08
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +1
Query: 148 IRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITG 294
+R+ F +CTV+T+AHRL T+ DSD++VV++ G++V+ + T L G
Sbjct: 1300 VREEFRNCTVITIAHRLSTIMDSDQLVVLDRGEVVETGSPTELLERRAG 1348
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = +1
Query: 115 DPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVD 255
D + A++++++R +CTV+T+AHRL T+ SDRV+VM G+I++
Sbjct: 942 DDDVSAIMEETVRTQLQECTVITIAHRLGTIMASDRVMVMREGRIIE 988
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/57 (36%), Positives = 39/57 (68%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVAT 264
DEAT+ +D ++ L+Q +I K+ TV+ +AHRL T+ +D ++V++ GQ+ ++ T
Sbjct: 517 DEATSALDAESEHLVQDAIYKNLQGHTVLIIAHRLSTIEKADLIIVIDKGQVAEIGT 573
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +1
Query: 133 LIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITGISRKWL 312
++++ I+ F+ CTV+T+AHRL T+ D DR+VV++ Q+ +V T +R G+ +
Sbjct: 1443 VLKEVIQLKFSGCTVLTIAHRLSTITDYDRIVVIDNHQVAEVGTPMELVRKNKGLFACMM 1502
Query: 313 NN 318
N
Sbjct: 1503 KN 1504
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
V G NFSAG+ DEATA+VD TD IQ++IR+ F TV+
Sbjct: 516 VGERGRNFSAGQRQLVCLARAMLTRAKILCIDEATASVDMETDRFIQRTIREAFRTSTVL 575
Query: 181 TVAH 192
T+AH
Sbjct: 576 TIAH 579
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/102 (24%), Positives = 46/102 (45%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRKHFADCTVV 180
V GS S G+ DEAT+ +D ++ ++Q ++ K T +
Sbjct: 766 VGEQGSQLSGGQKQRVAIARALVRNPRILILDEATSALDTESERVVQAALDKAREGRTTL 825
Query: 181 TVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITGISRK 306
+AHRL TV ++D + + G +V+ + + T G+ R+
Sbjct: 826 VIAHRLSTVRNADMIAAIHNGVVVETGSHAELMAT-DGVYRQ 866
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQK--SIRKH 159
V GG+NFS G+ DEATANVD TD LIQ+ +RKH
Sbjct: 517 VKEGGTNFSVGQRQLLCLARALLQKCKILVLDEATANVDYRTDRLIQEVMCLRKH 571
>SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3)
Length = 222
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 264 PYELLKNDNGHFSKMVKQLGPASEQSLRELARDAHAQHIQYVDADDQDKTK 416
PY LLK +N FS +V Q G + L E+AR+A+ H +++++++ +
Sbjct: 73 PYLLLKEENSVFSALVNQTGRDESRVLFEVAREAYYSHKPIPESEEEEEAE 123
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 94 DEATANVDPNTDA-LIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLT 270
D+ + VD N L Q+ I + D + V H L + D+D ++V++ GQ +D T
Sbjct: 499 DDPLSAVDANVGRHLFQECICTYLKDKARILVTHLLQFLKDADEIMVLQQGQCIDKGTYQ 558
Query: 271 SYLRTITG 294
R +G
Sbjct: 559 QLSRNDSG 566
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 94 DEATANVDPNTDA-LIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLT 270
D+ + VD N L Q+ I + D + V H L + D+D ++V++ GQ +D T
Sbjct: 168 DDPLSAVDANVGRHLFQECICTYLKDKARILVTHLLQFLKDADEIMVLQQGQCIDKGTYQ 227
Query: 271 SYLRTITG 294
R +G
Sbjct: 228 QLSRNDSG 235
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 136 IQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVAT 264
I ++R+ T + +AHRL TV D+D ++V+E G++ + T
Sbjct: 542 ILSALRRVTKGRTSIFIAHRLSTVVDADEILVLEHGKVRERGT 584
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 133 LIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRT 285
+ Q+ I + D + V H L + +D+VV+ME G+IV + Y+ T
Sbjct: 235 VFQRCICELLRDKLCILVTHDLGCIEKADKVVIMEGGKIVKQSIYKEYIDT 285
>SB_49476| Best HMM Match : ABC_tran (HMM E-Value=0.00018)
Length = 127
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 1 VASGGSNFSAGKXXXXXXXXXXXXXXXXXXXDEATANVDPNTDALIQKSIRK 156
+ GS FS G+ DEATANVD TD L+Q+ +RK
Sbjct: 72 LGESGSGFSVGERQLLCLARALLQNSKLIVIDEATANVDYRTDRLVQQ-VRK 122
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 97 EATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVADSDRV 225
EAT+ +D ++ ++++I + + TV+ +AHRL TV ++ V
Sbjct: 282 EATSALDAESEHFVKEAIDRAMVNRTVLVIAHRLSTVRSANLV 324
>SB_27186| Best HMM Match : ABC_tran (HMM E-Value=0.76)
Length = 175
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 172 TVVTVAHRLHTVADSDRVVVMEAGQIVDVAT 264
TV+ +AHRL TV ++D + V++ G++ + T
Sbjct: 119 TVIMIAHRLSTVKNADVICVIDHGRVAEHGT 149
>SB_51554| Best HMM Match : ABC_tran (HMM E-Value=0.76)
Length = 175
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 172 TVVTVAHRLHTVADSDRVVVMEAGQIVDVAT 264
TV+ +AHRL TV ++D + V++ G++ + T
Sbjct: 119 TVIMIAHRLSTVKNADVICVIDHGRVAEHGT 149
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 130 ALIQKSIRKHFADCTVVTVAHRLHTVADSDRVVVMEAGQIVDVATLTSYLRTITGISR 303
+ I+ + + D V HR V R V+ ++G ++ V TSY R++T SR
Sbjct: 872 SFIKIGLEEFTVDTNGSIVVHRTKNVYPPGRFVMSKSGVLICVDYATSYSRSVTRTSR 929
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 263 VATSTIWPASMTTTRSESATVCSRWATVTTVQSAKCLRIDFWISASVFGS-TLAVASSNT 87
+ T T A++TT + +AT+ + ATVTTV +A +A+ + T+A A+ T
Sbjct: 637 LTTVTTAAATLTTVTTAAATLTTAAATVTTVTTAAATLTTVTTAAATLTTVTIAAATLTT 696
Query: 86 SSLFL 72
++ L
Sbjct: 697 AAATL 701
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -1
Query: 260 ATSTIWPASMTTTRSESATVCSRWATVTTVQSAKCLRIDFWISASVFGSTLAVASSNTSS 81
AT T A++TT + TV + ATVTTV +A + +A+ +T+A A++ ++
Sbjct: 561 ATVTTAAATVTTAAATVTTVTTAAATVTTVTTA-AATVTTVTTAAATVTTVATAAATVTT 619
Query: 80 L 78
+
Sbjct: 620 V 620
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -1
Query: 263 VATSTIWPASMTTTRSESATVCSRWATVTTVQSAKCLRIDFWISASVFGSTLAVASSNTS 84
+ T T A++TT + TV + AT+TTV +A I+A+ + A ++ T+
Sbjct: 647 LTTVTTAAATLTTAAATVTTVTTAAATLTTVTTAAATLTTVTIAAATLTTAAATLTTVTT 706
Query: 83 S 81
+
Sbjct: 707 A 707
>SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9)
Length = 237
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 239 ASMTTTRSESATVCSRWATVTTVQSAKCLR 150
A ++T ++ +TVC++W+TV T S C +
Sbjct: 187 AKLSTVCTKWSTVCTKWSTVCTKWSTVCAK 216
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAHRLHTVAD--SDRVVVMEAGQI 249
DE T+ +DP + KH A TV+ H + AD DR+ +M GQ+
Sbjct: 357 DEPTSGMDPYARRATWDLLLKHKAGKTVILTTHFMDE-ADFLGDRIAIMADGQL 409
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 192 STTHRCGF*SSCGHGSRPDRRCGHPYELLKNDNGHFSKMVKQLGP 326
S CG ++ G+ P CG P E +GH+ + + LGP
Sbjct: 752 SAAQHCG--TNAGYCGIPSNHCGTPLETSGTSSGHY-RTFRGLGP 793
>SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52)
Length = 460
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +3
Query: 162 CGLHRCHSRPST---THRCGF 215
CG HRC RP T TH+C F
Sbjct: 13 CGRHRCAHRPETRGPTHKCLF 33
>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
Length = 546
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 641 YHQNLSNTLSTSYIKPAFDSPVVK*LFELIDTTTECRLPLFGL 513
++ N N ++ S I + VVK +ID TT+ +L LF +
Sbjct: 198 FYLNQGNCVTVSTINDNVEFKVVKEALSVIDMTTDVQLALFSI 240
>SB_30104| Best HMM Match : Exo_endo_phos (HMM E-Value=0.042)
Length = 267
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 174 RCHSRPSTTHRCGF*SSCGHGSRPDRRCGHPYELLKNDNGHFSKMVKQLGPASEQSLRE 350
R H RP+ T CG + R G+ +LL+N ++ + K +G A E+ + E
Sbjct: 149 RAHGRPARTFPCG-----DSFMKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILE 202
>SB_6987| Best HMM Match : RVT_1 (HMM E-Value=2.2e-21)
Length = 521
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 247 IVDVATLTSYLRTITGISRKWLNNWVPPQSRALENLR 357
I DVAT+ LR + ++WL W PQ RA + ++
Sbjct: 201 IPDVATINEPLRQLLKKEQQWL--WDQPQERAFQAIK 235
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 94 DEATANVDPNTDALIQKSIRKHFADCTVVTVAH 192
DEAT+ +D T+ IQ S+ + T + VAH
Sbjct: 303 DEATSALDTETERNIQASLNNMCINRTTIVVAH 335
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 111 CRSEY*CTDPEVYSQTFCGLHR-CHSRPSTTHRCGF*SSCGHGSRPDRRCGHPY 269
CR +Y C + Y +T+C R C+ + + C C +GS C +PY
Sbjct: 3001 CRPKYFCREGAKY-ETYCPAGRFCNYTTAEPYICPGGHYCPNGSDTYTPCEYPY 3053
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,513,564
Number of Sequences: 59808
Number of extensions: 434725
Number of successful extensions: 1085
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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