Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1517
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    23   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 245 ENLLYATIWVRSFSSLWRCL 304
           ENL  +  ++  F S+W+CL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 245 ENLLYATIWVRSFSSLWRCL 304
           ENL  +  ++  F S+W+CL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 245 ENLLYATIWVRSFSSLWRCL 304
           ENL  +  ++  F S+W+CL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 245 ENLLYATIWVRSFSSLWRCL 304
           ENL  +  ++  F S+W+CL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCL 308


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 552 HKTDNSICENLKISTLMYNCILLVGVFG 469
           H T N   +   +  L+  C + V +FG
Sbjct: 31  HTTSNKQLQFFAVEHLLIQCYIAVSIFG 58


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 433 VLALISFAINVLAKYPYEKDTVVHQGGD 516
           V + I+FA+ VLA +P  ++ +V +  D
Sbjct: 1   VSSAINFALMVLANHPTVQEEIVQEMKD 28


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 492 YSCTSGWRFLDFHISNYPSYVLGNSIEFCL 581
           Y+ +S   F +   S +P+Y+   S+ FC+
Sbjct: 47  YNTSSVSNFNESSSSVFPNYIRTTSMVFCI 76


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 492 YSCTSGWRFLDFHISNYPSYVLGNSIEFCL 581
           Y+ +S   F +   S +P+Y+   S+ FC+
Sbjct: 47  YNTSSVSNFNESSSSVFPNYIRTTSMVFCI 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,503
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)