Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1517
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycero... 31 0.93
AC006769-15|AAF60587.1| 337|Caenorhabditis elegans Serpentine r... 30 1.2
AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.8
U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr... 27 8.7
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 226 FATRRV*EFVVRNNLGPFIQFFVALFVNLFLYPFIATQWVPFSELCVLSFFLM 384
FA R + ++RNN FFV FV+ F + ++ + VP + S++ M
Sbjct: 386 FAVRHIYSPMMRNNFSKMSAFFVVFFVSAFFHEYLVS--VPLKIFRLWSYYGM 436
>Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 226 FATRRV*EFVVRNNLGPFIQFFVALFVNLFLYPFIATQWVPFSELCVLSFFLM 384
FA R + ++RNN FFV FV+ F + ++ + VP + S++ M
Sbjct: 386 FAVRHIYSPMMRNNFSKMSAFFVVFFVSAFFHEYLVS--VPLKIFRLWSYYGM 436
>AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycerol
acyltransferase protein.
Length = 498
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 226 FATRRV*EFVVRNNLGPFIQFFVALFVNLFLYPFIATQWVPFSELCVLSFFLM 384
FA R + ++RNN FFV FV+ F + ++ + VP + S++ M
Sbjct: 388 FAVRHIYSPMMRNNFSKMSAFFVVFFVSAFFHEYLVS--VPLKIFRLWSYYGM 438
>AC006769-15|AAF60587.1| 337|Caenorhabditis elegans Serpentine
receptor, class j protein19 protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 268 LGPFIQFFVALFVN-LFLYPFIATQWVPFSELCVLSFFLMFLTLCSFGAN 414
L P I FF++L N +F+Y +++ V F LS+F LC+ A+
Sbjct: 9 LVPKISFFLSLVFNPVFVYLIHSSKHVLFGNYRYLSYFFAIFNLCASAAD 58
>AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical
protein Y105C5B.4 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 277 FIQFFVALFVNLFLYPFIATQWVPFSELCVLSFFLMFLTLCSFGANGNPYPDVLALISFA 456
FI + + V L + F + + + F EL + F+L + L A+ NPY L+
Sbjct: 241 FIMISITVAVQLTILIFFSLKLLKFFELNMEEFYLFYNALSDLFASINPY-----LLWIF 295
Query: 457 INVLAKYPYEK 489
+ L KY Y K
Sbjct: 296 SDSLRKYVYWK 306
>Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical
protein F09F3.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 277 FIQFFVALFVNLFLYPFIATQWVP---FSELCVLSFFLMFLTLCSF 405
F+ FF F N+FL+ AT W F +LC + + CSF
Sbjct: 27 FLGFF-GTFCNIFLFFKFATSWKTLNGFKKLCFMKTIANSIVCCSF 71
>U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical
protein C02H7.2 protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 253 VVRNNLGPFIQFFVALFVNLFLYPFIATQWVPFSELCVLSFFLM 384
V + + FIQFFV V FL + QW+P+ ++F+M
Sbjct: 265 VSKKEMRLFIQFFVVSLV--FLLTWTTWQWLPYMSESKWAYFVM 306
>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
protein F43G6.1b protein.
Length = 1069
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 179 DFRKWSGLFLRYSDGNLQPDESENLLYATIWVRSFSSLWRC 301
+F K + +++ + E ++ YA W+R S+ W+C
Sbjct: 439 NFSKSNDKMKNFAENEMAHLEQNHIEYAANWIRWISAEWKC 479
>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
protein F43G6.1a protein.
Length = 1105
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 179 DFRKWSGLFLRYSDGNLQPDESENLLYATIWVRSFSSLWRC 301
+F K + +++ + E ++ YA W+R S+ W+C
Sbjct: 475 NFSKSNDKMKNFAENEMAHLEQNHIEYAANWIRWISAEWKC 515
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 582 SNKTLCYSRGHKTDN 538
S KTLC RGHK DN
Sbjct: 852 SYKTLCEQRGHKLDN 866
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,663,787
Number of Sequences: 27780
Number of extensions: 313474
Number of successful extensions: 847
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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