Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1517
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.9  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   3.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   5.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 537 NYPSYVLGNSIEF-CLNGRMFF 599
           NYP ++L NS+ F  + G  +F
Sbjct: 238 NYPPFMLSNSLNFPQIRGEFYF 259


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 537 NYPSYVLGNSIEF-CLNGRMFF 599
           NYP ++L NS+ F  + G  +F
Sbjct: 238 NYPPFMLSNSLNFPQIRGEFYF 259


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 413 LAPNEHSVRNIRKKDNTQSSENG 345
           LA +E S+  +RK ++  + ENG
Sbjct: 16  LAVSEESINKLRKIESVCAEENG 38


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 442 LISFAINVLAKYPYEKDTVVHQGGDF 519
           L  F I  +  YP+E+D  +++G ++
Sbjct: 309 LFEFPIKFVPSYPFEED--INEGSNY 332


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 379 LMFLTLCSFGANGNPYPDVLALISFAINVLAK 474
           L+ L L   G   NP P  + LISF   +L +
Sbjct: 74  LVGLILGFLGRLANPTPQSITLISFPGELLMR 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,719
Number of Sequences: 438
Number of extensions: 3949
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)