Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1516
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 35 0.060
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409... 33 0.24
12_02_1021 + 25364349-25364465,25367237-25367324,25367851-253680... 32 0.42
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104... 32 0.56
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 31 0.74
10_08_0897 - 21419639-21420633,21420826-21421153 31 0.97
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 31 0.97
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 31 0.97
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 31 1.3
07_01_0894 - 7501918-7502535,7503568-7503604,7503781-7503951,750... 31 1.3
06_02_0162 + 12466027-12466354,12466894-12467546 31 1.3
10_06_0180 + 11526139-11526172,11526365-11527218 30 1.7
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 30 2.2
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 29 3.0
06_03_0498 - 21432958-21434245,21434579-21435310,21435502-214357... 29 3.0
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258... 29 3.0
04_01_0277 + 3681869-3681922,3681946-3682004,3683011-3683631,368... 29 3.0
09_02_0108 - 4358051-4358645,4358722-4359137,4360307-4360903,436... 29 3.9
03_01_0630 + 4635297-4636220 29 3.9
12_01_0800 - 7331444-7331539,7331617-7331742,7331830-7331907,733... 29 5.2
10_08_0082 + 14713989-14714046,14714109-14714953 29 5.2
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 29 5.2
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 29 5.2
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 5.2
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 28 6.9
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 6.9
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 28 6.9
03_02_0064 + 5353417-5353419,5353440-5353536,5353631-5353699,535... 28 6.9
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 28 6.9
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 28 6.9
01_01_0766 - 5928283-5929092 28 6.9
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 28 9.1
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +1
Query: 547 DLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCLNM 726
++ +K++ ++ +T SLK ++ + Q +T L S+ +S QEE L + ++L LN
Sbjct: 612 EITQKSESMDSLTLSLKDETEKRVQAETSLMSMESMYSQSQEEVNRLHLEIEKLNFKLNE 671
Query: 727 TTKIS 741
+S
Sbjct: 672 LENLS 676
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKK 714
+DL++K + + L+ + Q + DL+ + HS L+EE L D+ K
Sbjct: 485 QDLEQKRQEADSAHAQLQDECNRHTQTEADLHRFKNLHSQLEEEVIKLTENLDRSTK 541
>03_05_0510 +
25039408-25039455,25040627-25040641,25040832-25040991,
25041116-25041192,25041324-25042528,25042537-25042621,
25043068-25043130,25043207-25043263,25043299-25043361,
25043560-25043643,25043730-25044320,25044535-25044663
Length = 858
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 323 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANL 481
K + L++K K+K E LKDK+ V ++ +K++E S S+ LK L
Sbjct: 570 KDMYEHLVQKKGKLKKEVLSLKDKYKLVLEKNDKLEEQMASLSSSFLSLKEQL 622
>12_02_1021 +
25364349-25364465,25367237-25367324,25367851-25368004,
25368196-25368271,25368350-25368475,25369400-25369744
Length = 301
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEA 678
+++EN LQ++ L ++T KQ + E +Q D+N++RR+ ++ EEA
Sbjct: 149 LRSENASLQKR---LSDMTQKYKQSTTEYGNLQDDMNAMRRK-VNIAEEA 194
>03_05_1143 + 30709825-30709926,30710105-30710260,30710356-30710439,
30710769-30710882,30711019-30711111,30711888-30711977,
30712157-30712227,30712300-30712374,30712481-30712568,
30712748-30712806,30712893-30712956,30713030-30713095,
30713283-30713435,30713522-30713626,30713739-30713974,
30714104-30714173,30714286-30714339,30714501-30714557,
30714662-30714741,30716056-30717919
Length = 1226
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 550 LQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALR-VLTDQLKKCLNM 726
L+ + EE++ S++ EL Q D+N+L+ S QE EAL + C N+
Sbjct: 887 LEMASTKAEELSASIQHHCLELKHDQEDMNALKAELSQSQESKEALESKYFSPVASCWNL 946
Query: 727 TTKISLL 747
K L
Sbjct: 947 DLKTKAL 953
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 329 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANL 481
+ N+L EKH +++S+ K++ E S E K KE +S +D LK N+
Sbjct: 603 KLNELQEKHTQLQSDLQKSKERKEEKSAELSKNKELLKS----QDQLKRNI 649
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 613 LDQVQTDLNSLRRRHSSLQEEAEALR 690
L+Q+Q +LNS++R +L E + LR
Sbjct: 456 LEQIQLELNSVQRTRDTLNNEVDDLR 481
>10_08_0897 - 21419639-21420633,21420826-21421153
Length = 440
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 218 D*EICNCTIIDNIPNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKK-MKSEFTDLKDK 394
D E + IIDN ++++++ ++ +I Y+ K R D+ +++ MKSE+ ++DK
Sbjct: 224 DAESSDRDIIDNRRHSISELMEKLDHESEIKYYEDKLR--DIADEYNNSMKSEWPKIRDK 281
Query: 395 HLEVSDEYEKIKE 433
L E +IK+
Sbjct: 282 ELYFYRELSRIKK 294
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +1
Query: 595 KQKSFELDQVQTDLNSLRRRHSSL---QEEAEALRVLTDQLKKCL 720
+Q+ FELD+++ +LN + L +E+A AL T+++KK L
Sbjct: 43 RQRQFELDKIRQELNKTSKEIGKLKAKKEDASALIQSTEEIKKRL 87
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +1
Query: 595 KQKSFELDQVQTDLNSLRRRHSSL---QEEAEALRVLTDQLKKCL 720
+Q+ FELD+++ +LN + L +E+A AL T+++KK L
Sbjct: 43 RQRQFELDKIRQELNKTSKEIGKLKAKKEDASALIQSTEEIKKRL 87
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 218 D*EICNCTIIDNIPNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKK-MKSEFTDLKDK 394
D E + IIDN ++++++ ++ +I Y+ K R D+ +++ MKSE+ ++DK
Sbjct: 224 DAESSDRDIIDNRRHSISELMEKLDHESEIKYYEDKLR--DIADEYNNSMKSEWPKIRDK 281
Query: 395 HLEVSDEYEKIKE 433
L E +IK+
Sbjct: 282 KLYFYRELSRIKK 294
>07_01_0894 -
7501918-7502535,7503568-7503604,7503781-7503951,
7504396-7504631,7504796-7504867,7504963-7505097,
7505544-7505549
Length = 424
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 329 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSN 454
RFN L +K K+ S+ + K+K + V +E +KIK+ ++ S+
Sbjct: 303 RFNILSQKMIKLASDTSKTKEKFVYVMNESDKIKDGLKAMSD 344
>06_02_0162 + 12466027-12466354,12466894-12467546
Length = 326
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 242 IIDNIPNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKK-MKSEFTDLKDKHLEVSDEY 418
IIDN ++++++ ++ +I Y+ K R D+ +++ MKSE+ ++DK L E
Sbjct: 116 IIDNRRHSISELMEKLDHESEIKYYEDKLR--DIADEYNNSMKSEWPKIRDKELYFYREL 173
Query: 419 EKIKE 433
+IK+
Sbjct: 174 SRIKK 178
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 580 VTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
V F ++ ++ Q++ D +LR RH +L+ E +ALR D L
Sbjct: 98 VWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDAL 140
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 239 TIIDNIPNNVTKVEKRSTVAPKIPPYDFKARFN---DLLEKHKKMKSEF 376
+++++I + + K + P++PP+DF A DL++ HK+ ++ F
Sbjct: 1317 SVVNHIDEILDRYIKEKELFPQVPPHDFAAMEQIKLDLMQLHKRWQAIF 1365
>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 308 PPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSD 412
PP K+ F+DLLEK KK DK +++SD
Sbjct: 1114 PPKPKKSGFDDLLEKAKKQVLGLCGHCDKEVKISD 1148
>06_03_0498 -
21432958-21434245,21434579-21435310,21435502-21435788,
21435955-21436026,21436130-21436264,21436887-21436925
Length = 850
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 329 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSN 454
RFN L +K K+ S+ + K+K + V +E +KI++ ++ S+
Sbjct: 688 RFNILSQKMIKLASDASKTKEKFIYVMNESDKIEDGLKAMSD 729
>04_04_0717 -
27525117-27525248,27525384-27525549,27525629-27525831,
27525911-27526048,27526642-27526725,27526864-27526950,
27527048-27527120,27527169-27527432,27527692-27527768,
27527886-27527957,27528049-27528209,27528238-27528484,
27528588-27528707,27528846-27528929,27529205-27529341,
27529689-27529856,27530093-27530317,27530865-27530952,
27531033-27531194,27532797-27532919
Length = 936
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 224 EICNCTIIDNIPNNVTKVEKRSTVAPKIPPYDFKAR-FNDLLEKHKKMKSEFTDLKDKHL 400
E C + +P N + +ST + + + + ++L KHK++ ++ + +D
Sbjct: 186 EECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSA 245
Query: 401 EVSDEYEKIKETFQSCSNERDILKANLSVKTLEYD 505
E+ ++KE S ++E + L+ + D
Sbjct: 246 RKRAEHRRLKEELASAASELEETNYKLAALKAQRD 280
>04_01_0277 +
3681869-3681922,3681946-3682004,3683011-3683631,
3683718-3684147
Length = 387
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 520 FDVMKTEN-EDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVL 696
FD K E ++L+ +EE+ ++ E D +Q ++ + +HSS + E LR+
Sbjct: 264 FDAEKAETMKELEDHKMDVEEIPTTMDLMKGENDNIQLEVLTAAHQHSSCEAGVERLRME 323
Query: 697 TDQL 708
D L
Sbjct: 324 LDVL 327
>09_02_0108 -
4358051-4358645,4358722-4359137,4360307-4360903,
4361068-4361139,4361236-4361370,4361485-4361585,
4362719-4362863
Length = 686
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 329 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSN 454
RFN L +K K+ S+ + K+K + V +E +KI++ ++ S+
Sbjct: 518 RFNILSQKMIKLASDASKTKEKFVYVMNESDKIEDGLKAMSD 559
>03_01_0630 + 4635297-4636220
Length = 307
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 580 VTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
V F ++ ++ Q++ D +LR RH +L+ + +ALR D L
Sbjct: 85 VWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDAL 127
>12_01_0800 -
7331444-7331539,7331617-7331742,7331830-7331907,
7332515-7332747,7332832-7332871,7333016-7333070,
7333158-7333345,7333416-7333475,7333686-7333769,
7334817-7334903,7335178-7335246,7335354-7335410
Length = 390
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/58 (25%), Positives = 37/58 (63%)
Frame = +1
Query: 532 KTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQ 705
+ E E+L ++ ++L++ SL+ E+++++ + + L ++SSL+E+ E + TD+
Sbjct: 317 QAECEELAQRAEVLKQENTSLRD---EVNRIRKEYDELLSKNSSLKEKLEDKQHKTDE 371
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 230 CNCTIIDNI-PNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHK 358
C+ +ID I T++ + +PP D + DLLE K
Sbjct: 85 CDIVVIDEIRAEESTEITTTTAAVVTVPPSDLNQQLGDLLESEK 128
>06_01_0456 -
3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 312 GGIFGATVDLFSTFVTLFGMLSMMVQLQIS*SEVQQQKQVGHFV 181
G IF ++ F+ F+T F +L+ ++Q+Q+ Q Q G F+
Sbjct: 719 GQIFNRHLNYFTIFITHFVLLACVLQIQVEIRATQNYHQ-GQFI 761
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 263 NVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
N++K ++ S VA PP D+K D + H S+FT ++ +L ++ + T
Sbjct: 2495 NISKHQRTSGVASSWPPNDWKTA-PDFITSH---NSQFTPNQETNL--NNVVPSLDLTKT 2548
Query: 443 SCSNERDIL 469
C N DI+
Sbjct: 2549 QCENSEDIV 2557
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 347 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
+K + +E +LKD S++ E++KE +S S +++ LK EY+E
Sbjct: 128 DKDENTNTEKQELKDAKESGSEKQEELKEQDKSGSEKQEELKEQDKSGLAEYEE 181
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEE-VTFSLKQKS---FELDQVQTDLNSLRRRHSSLQEEAEALRVL 696
++ E L+ +LLEE V+ +++K +EL Q++ D R+H S++E+ + +
Sbjct: 372 LQDEVISLKNAQRLLEEEVSRHVEEKKVLQYELSQLKDDKGDSERKHFSIKEQIQVVNFN 431
Query: 697 TDQLK 711
+ L+
Sbjct: 432 VESLQ 436
>06_01_1032 +
8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 350 KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE 499
++++ K + +L+ H +S YEK+KE S + K+ + +K L+
Sbjct: 761 RYEENKRKALELQKAHRRISASYEKLKENVSSSEDLSAKTKSVIELKKLQ 810
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 350 KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERD 463
+ K +++E ++LK + V +YE+ + T +S + +RD
Sbjct: 274 RRKLLEAEMSELKHLYGNVVSDYEEARSTIESLAAKRD 311
>03_02_0064 +
5353417-5353419,5353440-5353536,5353631-5353699,
5353783-5353875,5353991-5354114,5354733-5354802,
5354876-5354917,5355072-5355200,5355288-5355395,
5357747-5357881,5358064-5358099
Length = 301
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 568 LLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKK--CLNMTTKIS 741
++EE FS + D+V +L+ + +S + A V DQ++ C + T +S
Sbjct: 82 MIEEYAFSFSYPNMSGDEVAINLSRTESKKNSATFKPNAAEVTPDQMRSSACKMIRTLVS 141
Query: 742 LL 747
L+
Sbjct: 142 LM 143
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCL 720
+DL++K + + L+ + Q + DL+ + HS L+EE L D+ K L
Sbjct: 705 QDLEQKRQEADNAHAQLQDECNRHTQTEADLHRFKNLHSQLEEEVIKLTENLDRSTKGL 763
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 547 DLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLK 711
DL R K++ E+ +++ + + Q T+LN + + S +A++L DQL+
Sbjct: 485 DLSRMEKVVTELESTIRDQRELISQQHTELNLMNEKLSIESRKAKSLERDGDQLR 539
>01_01_0766 - 5928283-5929092
Length = 269
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEAL 687
+KV+ + K EN LQ+ LE K+ + LDQ + +N+ + + AE+L
Sbjct: 184 LKVDLESAKRENSYLQQS---LERFAQGKKKLNMILDQSKVSINNQGIGYDFAYDFAESL 240
Query: 688 RVLTDQL 708
R+ T ++
Sbjct: 241 RIGTHEI 247
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKAN 478
+ ++R + + E K K +FT +D + + I E + NER I+KA+
Sbjct: 28 ELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFIVKAS 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,445,705
Number of Sequences: 37544
Number of extensions: 249753
Number of successful extensions: 1052
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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