Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1516
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 35 0.070
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 34 0.093
U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical pr... 34 0.093
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 33 0.16
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 33 0.16
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 33 0.16
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 33 0.16
AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical ... 33 0.21
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 32 0.38
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 0.50
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 0.50
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 0.50
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 32 0.50
AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical ... 31 0.66
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 31 1.1
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 31 1.1
AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical ... 30 2.0
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.6
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.5
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.5
AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical ... 29 3.5
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 29 3.5
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 4.6
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 4.6
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 4.6
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 6.1
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 6.1
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 28 6.1
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 28 6.1
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 28 6.1
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 28 6.1
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 28 8.1
U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical p... 28 8.1
AY357729-1|AAQ84518.1| 329|Caenorhabditis elegans two-pore K+ c... 28 8.1
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 28 8.1
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 8.1
AF083652-1|AAC32863.1| 329|Caenorhabditis elegans putative pota... 28 8.1
AF025454-3|AAC71151.2| 329|Caenorhabditis elegans Suppressor pr... 28 8.1
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 8.1
>U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical
protein M03E7.5 protein.
Length = 216
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Frame = +1
Query: 517 NFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDL----NSLR---RRHSSLQEE 675
N +MKTE + +++L E ++ SF++DQ+++D+ NSLR RH++ +++
Sbjct: 39 NSSLMKTETHMFRLESQLGREPAPVRQKASFKMDQLKSDVCLIKNSLRTMTNRHTNRKKQ 98
Query: 676 AEALRVLTDQLKKCLNMTTKISL 744
AE + L Q + N T+++L
Sbjct: 99 AEEKKALLKQ-RFTTNQETRVNL 120
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 NNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKET- 436
N + STV P+ P + ++ +D+L + KK K + LE+ + +K+ +
Sbjct: 403 NQTDLTDLHSTVRPEDPSFAIDSQIHDVLPQRKKSKRNLPIIHSDDLEIDEAVQKVLQAD 462
Query: 437 FQSCSNERDILKANLSVKT 493
+ S +++ + A + KT
Sbjct: 463 YSSLVRKKEDVIAKIPPKT 481
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTK-LLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEE 675
I++N D+ K ++QR+ L+++ K+K +DQ+QT + L R + LQ+E
Sbjct: 193 IELNLDIDKMNQTEIQRQVDDALKQLVNPFKEKGQLVDQLQTQITDLERFVNFLQKE 249
>U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical
protein F23F12.9a protein.
Length = 176
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 532 KTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQ 705
+TENE L+RK LEE LKQ EL Q+Q + + + + E E L+++ ++
Sbjct: 94 QTENELLKRKNAALEE---ELKQAKCELAQMQITIRDMSIEREAYRRENEMLKMVNNK 148
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 323 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
+AR N+L + H+ + E LK HL +E E++KE
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKE 856
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 589 SLKQKSFELDQVQTDL-NSLRRRHSSLQEEAEALRVLTDQLKK 714
+L++K ELDQ TDL N +R+ L ++A V D L+K
Sbjct: 1086 NLEEKKNELDQNVTDLTNKVRQLEIQLMDKAAKNEVSGDLLRK 1128
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 323 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
+AR N+L + H+ + E LK HL +E E++KE
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKE 856
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 589 SLKQKSFELDQVQTDL-NSLRRRHSSLQEEAEALRVLTDQLKK 714
+L++K ELDQ TDL N +R+ L ++A V D L+K
Sbjct: 1086 NLEEKKNELDQNVTDLTNKVRQLEIQLMDKAAKNEVSGDLLRK 1128
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 323 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
+AR N+L + H+ + E LK HL +E E++KE
Sbjct: 580 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKE 616
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 589 SLKQKSFELDQVQTDL-NSLRRRHSSLQEEAEALRVLTDQLKK 714
+L++K ELDQ TDL N +R+ L ++A V D L+K
Sbjct: 846 NLEEKKNELDQNVTDLTNKVRQLEIQLMDKAAKNEVSGDLLRK 888
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 323 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
+AR N+L + H+ + E LK HL +E E++KE
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLKE 856
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 589 SLKQKSFELDQVQTDL-NSLRRRHSSLQEEAEALRVLTDQLKK 714
+L++K ELDQ TDL N +R+ L ++A V D L+K
Sbjct: 1086 NLEEKKNELDQNVTDLTNKVRQLEIQLMDKAAKNEVSGDLLRK 1128
>AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical
protein F57H12.6 protein.
Length = 205
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2
Query: 272 KVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCS 451
K EK +A K D +F + EK +K E+ K+K ++SDE +K E ++ +
Sbjct: 112 KPEKIEALAEKELDGDNLKKFKEFKEKKEKEDKEY---KEKETKLSDEAKKAHEKIEALN 168
Query: 452 NERDILKANLSVKTLE 499
++ + +LS K E
Sbjct: 169 KQKFEILGDLSEKAKE 184
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
MK + EDL+ + KLL E ++ K+ +LD + + R + L+++A L+ D L
Sbjct: 316 MKEKYEDLKSEAKLLRERVVEMEAKNEDLDD-RISKYEIEIRSNPLKKKAIQLQETLDTL 374
Query: 709 KK 714
KK
Sbjct: 375 KK 376
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
+ R +LL ++ ++KSE LKDK+ ++ +EY + +
Sbjct: 666 ELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIE 707
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 359 KMKSEFTDLKDKHL-EVSDEYEKIKETFQSCSNERDILKANLS 484
K+KS+ + L DKHL ++ DE E+ + ++ + D L+ L+
Sbjct: 1138 KLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLN 1180
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
+ R +LL ++ ++KSE LKDK+ ++ +EY + +
Sbjct: 739 ELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIE 780
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 359 KMKSEFTDLKDKHL-EVSDEYEKIKETFQSCSNERDILKANLS 484
K+KS+ + L DKHL ++ DE E+ + ++ + D L+ L+
Sbjct: 1211 KLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLN 1253
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
+ R +LL ++ ++KSE LKDK+ ++ +EY + +
Sbjct: 739 ELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIE 780
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 359 KMKSEFTDLKDKHL-EVSDEYEKIKETFQSCSNERDILKANLS 484
K+KS+ + L DKHL ++ DE E+ + ++ + D L+ L+
Sbjct: 1211 KLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLN 1253
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 541 NEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLR-RRHSSLQEEAEAL 687
N++ +++ K++EE+ F+++QK +V ++LN L+ + S +EE L
Sbjct: 432 NDEKEKQKKVMEELQFTIEQKDENNGEVLSELNRLKDAKFGSAREEITRL 481
>AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AL.3 protein.
Length = 252
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 420 SYSSETSKCLSFK--SVNSLFIFLCFSNKSLNLAL 322
S S++TS CL FK VNS+F +C+ +K+ + L
Sbjct: 207 SCSTDTSDCLDFKYEDVNSIFFTICWDSKNYSNGL 241
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 123 ANGLSDVDKKNLITNHTRPLRNGPPVSAAAPRIKRSATAPSSTT 254
A L VD KNLIT+ + +GP +AAA AP++ T
Sbjct: 48 AKALEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAET 91
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 123 ANGLSDVDKKNLITNHTRPLRNGPPVSAAAPRIKRSATAPSSTT 254
A L VD KNLIT+ + +GP +AAA AP++ T
Sbjct: 48 AKALEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAET 91
>AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical
protein T05A8.2 protein.
Length = 221
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 12 CPAVETIRKMSKIP-KLPTISKENRFGQFHNRPISRTIANGLSDVDKKNLITNH 170
CP I KIP KLP++ K ++ +++++ T +N S D+ +I N+
Sbjct: 142 CPGPVYIPSQMKIPPKLPSVRKTKQY-RYNSKTEKFTFSNDSSSTDEVRVIANY 194
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEAL 687
I+ ++ + EN +LQR L+ T L ++SF DQ+ + NS + + + + +
Sbjct: 276 IETDYQALYRENAELQRALNELQLNTSDLSEESFLRDQI-SFANSTIEQQQLVIDATQDM 334
Query: 688 RVLTDQLKKCL 720
T QLK +
Sbjct: 335 MSQTAQLKSTI 345
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEAL 687
I+ ++ + EN +LQR L+ T L ++SF DQ+ + NS + + + + +
Sbjct: 276 IETDYQALYRENAELQRALNELQLNTSDLSEESFLRDQI-SFANSTIEQQQLVIDATQDM 334
Query: 688 RVLTDQLKKCL 720
T QLK +
Sbjct: 335 MSQTAQLKSTI 345
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 520 FDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLT 699
F+ K NE + +LLE+ + +LD+ + +++ R +H ++Q EA+ L
Sbjct: 1852 FEDEKRANEQAK---ELLEKSNLKNRNLRRQLDEAEDEMSRERTKHRNVQREADDLLDAN 1908
Query: 700 DQLKK 714
+QL +
Sbjct: 1909 EQLTR 1913
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 532 KTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEA 684
K E E L++K KL E++ KQ D+ +T+L +R+R L+ + ++
Sbjct: 378 KREKEYLEKKEKLAEKI----KQIEKSTDEQKTELERIRKRSEFLKRQLKS 424
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
+KT E L + +EE+ L +K EL++VQ + L ++ E + +V + L
Sbjct: 281 LKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFELDEAKVQGEHL 340
Query: 709 KK 714
+K
Sbjct: 341 EK 342
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
+KT E L + +EE+ L +K EL++VQ + L ++ E + +V + L
Sbjct: 281 LKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFELDEAKVQGEHL 340
Query: 709 KK 714
+K
Sbjct: 341 EK 342
>AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical
protein H28G03.3 protein.
Length = 199
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +1
Query: 514 VNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALR 690
V ++ MK +NE LQR+ E+ S+K+K E++++++ L +++E+ + R
Sbjct: 99 VEYEQMKNKNEYLQREH---AEMQKSIKRKDREIERLRSKNRRLEEEGRNIREQMPSTR 154
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 60 PTISKENRFGQFHNRPISRTIANGLSDVDKKNLITNHTRPLRNGPPVSAAAPRIKRSATA 239
P +R Q R + ++ + D++ N T + + PPVS A P ++T+
Sbjct: 267 PDDGLNDRLKQAATRMLVMDLSTDVPDINYLNTFTMNCGAVVVNPPVSCATPACINASTS 326
Query: 240 PSSTTFR 260
P S R
Sbjct: 327 PPSAFAR 333
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 260 NNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKET 436
+ + VEK S V K+P + K ++ ++ + + E +LK K E E+ K+T
Sbjct: 509 SGIVSVEKASVVVEKVPTPEEKDKYEVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKT 567
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 260 NNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKET 436
+ + VEK S V K+P + K ++ ++ + + E +LK K E E+ K+T
Sbjct: 525 SGIVSVEKASVVVEKVPTPEEKDKYEVDKKEFDEWEKEQEELKKKEKAEKKEKEEKKKT 583
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 335 NDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
NDL+ + ++ SE L+D++L EK++E E LK L K E +E
Sbjct: 358 NDLINQVDELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 335 NDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
NDL+ + ++ SE L+D++L EK++E E LK L K E +E
Sbjct: 358 NDLINQVDELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 335 NDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
NDL+ + ++ SE L+D++L EK++E E LK L K E +E
Sbjct: 340 NDLINQVDELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 397
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 335 NDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
NDL+ + ++ SE L+D++L EK++E E LK L K E +E
Sbjct: 358 NDLINQVDELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE 415
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFE-LDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCL 720
E L+ K K ++E ++ QK E L Q + L R SS +EE + + +KK L
Sbjct: 882 EQLETKIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMKKEL 941
Query: 721 N 723
+
Sbjct: 942 D 942
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical protein
T04H1.4a protein.
Length = 1298
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFE-LDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCL 720
E L+ K K ++E ++ QK E L Q + L R SS +EE + + +KK L
Sbjct: 868 EQLETKIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMKKEL 927
Query: 721 N 723
+
Sbjct: 928 D 928
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFE-LDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCL 720
E L+ K K ++E ++ QK E L Q + L R SS +EE + + +KK L
Sbjct: 868 EQLETKIKEIQECITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAEMEVQMMKKEL 927
Query: 721 N 723
+
Sbjct: 928 D 928
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 380 DLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE 499
++KD+ ++ S++Y TF + S+ L N SV+TLE
Sbjct: 297 EVKDEKVKTSNKYNHPVSTFATESSRNPELAQNKSVETLE 336
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 329 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYE-KIKETFQSCSNE 457
+F +LEKH E L D+HL + E + K+ T + E
Sbjct: 260 KFKQMLEKHASRNPEVKKLLDEHLRMGRELKAKVATTAEDSDGE 303
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 DFKARFNDLLEKHKK-MKSEFTDLKDKHLEVSDE-YEKIKETFQSCSNERDILKANLSVK 490
+FK + +K KK ++ EF +K E DE YEK+K + ++ ILK +
Sbjct: 363 NFKKELIEEFKKCKKGVEEEFEKKFEKIKEDYDELYEKLKRDQRDLERDQKILKKGTGER 422
Query: 491 TLEYDE 508
E+ E
Sbjct: 423 NKEFTE 428
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 DFKARFNDLLEKHKK-MKSEFTDLKDKHLEVSDE-YEKIKETFQSCSNERDILKANLSVK 490
+FK + +K KK ++ EF +K E DE YEK+K + ++ ILK +
Sbjct: 363 NFKKELIEEFKKCKKGVEEEFEKKFEKIKEDYDELYEKLKRDQRDLERDQKILKKGTGER 422
Query: 491 TLEYDE 508
E+ E
Sbjct: 423 NKEFTE 428
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/71 (28%), Positives = 39/71 (54%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEAL 687
+++NF+ ++TENE L KT+L E+ T ++ LD + D R ++E+ +
Sbjct: 39 LQINFEKIQTENEIL--KTQLEEKET-EAEESQRLLDVIHKD------RDECIEEKMKVS 89
Query: 688 RVLTDQLKKCL 720
R +++KK +
Sbjct: 90 RFYRNEIKKVI 100
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 365 KSEFTDLKDKHLEVSDEYEKIKETFQSCSNE 457
KSEF DK E+ D++E +K+ +CS E
Sbjct: 238 KSEFLFSFDKKFEIHDDFEILKKLNLACSLE 268
>U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical
protein C25H3.11 protein.
Length = 947
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 166 LVIKFFLSTSLRPLAIVLDMGRL*NCPNLFSFD 68
L++K ++ LRP++IV + G L LFS D
Sbjct: 680 LIVKHMVNCRLRPVSIVYEEGALEGLSTLFSDD 712
>AY357729-1|AAQ84518.1| 329|Caenorhabditis elegans two-pore K+
channel protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 520 FDVMKTENEDLQRKTKLLEEVTFSLKQK 603
FD ++TENE LQR KL++ V LK K
Sbjct: 26 FDALETENEILQR--KLVQRVREKLKTK 51
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 365 KSEFTDLKDKHLEVSDEYEKIKETFQSCSNE 457
KSEF DK E+ D++E +K+ +CS E
Sbjct: 238 KSEFLFSFDKKFEIHDDFEILKKLNLACSLE 268
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNS-------LRRRHSSLQEEA 678
E ++ + KLLE L+Q F+ ++T L + R+SSLQEEA
Sbjct: 448 EKVEEQAKLLEVNNKELEQSKFQEAHLRTQLEERTAVKVEIEERYSSLQEEA 499
>AF083652-1|AAC32863.1| 329|Caenorhabditis elegans putative
potassium channel subunitn2P38 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 520 FDVMKTENEDLQRKTKLLEEVTFSLKQK 603
FD ++TENE LQR KL++ V LK K
Sbjct: 26 FDALETENEILQR--KLVQRVREKLKTK 51
>AF025454-3|AAC71151.2| 329|Caenorhabditis elegans Suppressor
protein 9 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 520 FDVMKTENEDLQRKTKLLEEVTFSLKQK 603
FD ++TENE LQR KL++ V LK K
Sbjct: 26 FDALETENEILQR--KLVQRVREKLKTK 51
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +2
Query: 260 NNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETF 439
N + K K+ + K + +LEK+KK EF + V ++ +I
Sbjct: 201 NELAKKYAEQNAKLKLKLKEVKNNYASMLEKNKKKGEEFIKQSENSKAVVEKTVQISTVL 260
Query: 440 QSCSNERDIL 469
S ER+ L
Sbjct: 261 DSLQKEREDL 270
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +1
Query: 544 EDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNS-------LRRRHSSLQEEA 678
E ++ + KLLE L+Q F+ ++T L + R+SSLQEEA
Sbjct: 450 EKVEEQAKLLEVNNKELEQSKFQEAHLRTQLEERTAVKVEIEERYSSLQEEA 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,401
Number of Sequences: 27780
Number of extensions: 256138
Number of successful extensions: 1148
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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