Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1516
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 41 0.001
At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family pr... 35 0.066
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 34 0.12
At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 33 0.27
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 32 0.35
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 30 1.4
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 30 1.4
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 30 1.9
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 30 1.9
At4g31570.1 68417.m04483 expressed protein 29 2.5
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 29 2.5
At2g14045.2 68415.m01562 expressed protein 29 2.5
At2g14045.1 68415.m01561 expressed protein 29 2.5
At3g59200.1 68416.m06600 F-box family protein contains F-box dom... 29 3.3
At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin... 29 4.3
At3g12930.1 68416.m01611 expressed protein contains Pfam domain ... 29 4.3
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 29 4.3
At5g41140.1 68418.m05001 expressed protein 28 5.7
At5g13950.1 68418.m01631 expressed protein 28 5.7
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 28 5.7
At3g53560.1 68416.m05914 chloroplast lumen common family protein 28 5.7
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 28 5.7
At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related... 28 5.7
At2g33780.1 68415.m04143 VQ motif-containing protein contains PF... 28 5.7
At1g20530.1 68414.m02558 hypothetical protein 28 5.7
At1g03960.1 68414.m00381 calcium-binding EF hand family protein ... 28 5.7
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 7.6
At5g56160.1 68418.m07006 SEC14 cytosolic factor family protein /... 28 7.6
At5g28760.1 68418.m03532 hypothetical protein contains Pfam prof... 28 7.6
At5g27330.1 68418.m03263 expressed protein 28 7.6
At4g26660.1 68417.m03841 expressed protein weak similarity to ph... 28 7.6
At1g68790.1 68414.m07863 expressed protein 28 7.6
At5g52280.1 68418.m06488 protein transport protein-related low s... 27 10.0
At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 27 10.0
At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q0613... 27 10.0
At5g15040.1 68418.m01763 paired amphipathic helix repeat-contain... 27 10.0
At4g15030.1 68417.m02309 expressed protein 27 10.0
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 27 10.0
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 27 10.0
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +1
Query: 523 DVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTD 702
+++ TE ED+ RKT +LE+ L++ EL Q T L R+R S ++ EAL+ T
Sbjct: 463 NLVATE-EDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETS 521
Query: 703 QLKKCLNMTTKISL 744
+L L M K L
Sbjct: 522 EL-STLEMKLKEEL 534
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDL----NSLRRRHSSLQEE 675
IK D++ + DL+ +++ L E + +KSF LD+ + +L + R+ + L++E
Sbjct: 422 IKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDE 481
Query: 676 AEALRVLTDQLKKCL 720
E LR L +L++ L
Sbjct: 482 KERLRKLDLELQQSL 496
>At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 284
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +2
Query: 275 VEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSN 454
VE + + P+ P D D ++ K++ SE LK ++ ++DE ++ +
Sbjct: 26 VELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLRE 85
Query: 455 ERDILKANLSVKTLEYDE 508
E+ LK+++ L+Y +
Sbjct: 86 EKTSLKSDIENLNLQYQQ 103
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = +1
Query: 511 KVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALR 690
+++ ++MK + E ++ K LLE++ SLK+ + ++++ +L + S + E EAL
Sbjct: 718 ELHLEIMKFQKE-IEEKESLLEKLQDSLKEAELKANELKASYENL---YESAKGEIEALE 773
Query: 691 VLTDQLKK 714
D+LK+
Sbjct: 774 KAEDELKE 781
>At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13)
/ HD-ZIP transcription factor 13 identical to homeobox
gene 13 protein (GP:12325190) [Arabidopsis thaliana]
Length = 294
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 335 NDLLEKH-KKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANL 481
NDLL+ H +K+++E LK++ E ++ KET SCSN D NL
Sbjct: 160 NDLLQTHNQKLQAEIMGLKNR--EQTESINLNKETEGSCSNRSDNSSDNL 207
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
M ++++L +K +E++ ++++ ++ L +L HS QEE +VLT +L
Sbjct: 379 MSAKDQELSQKQNEIEKLQAVMQEEQLRFSELGASLRNLESLHSQSQEEQ---KVLTSEL 435
Query: 709 KKCLNMTTKISL 744
+ M ++ +
Sbjct: 436 HSRIQMLRELEM 447
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 520 FDVMKTENED-LQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRV 693
+++ K E E L KTK LEE L++ S LDQ + D L + + + E L V
Sbjct: 405 YELTKKELEQSLAEKTKELEECLTKLQEMSTALDQSELDKGELAKSDAMVASYQEMLSV 463
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 550 LQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKKCLN 723
L+ + + E+ LK K+ E+D + +NSL+ LQEE ++ +L+ N
Sbjct: 158 LKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQNGIVRKELEVARN 215
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 532 KTENEDLQRKTKLLEEVTFSL-KQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
K E E+ +R ++L + L KQK EL++VQTDL ++ ++++ L D+
Sbjct: 154 KMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRY 213
Query: 709 KKCLNM 726
L M
Sbjct: 214 SVKLRM 219
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNS--LRRRHSSLQEEAE 681
+K VMK E+ED + K ++++ L++K EL ++ D NS + + S E E
Sbjct: 421 LKGKLKVMKHEDEDDEGIKKKMKKMKEELEEKCSELQDLE-DTNSALMVKERKSNDEIVE 479
Query: 682 ALRVLTDQLKKCLN 723
A + L +L++ ++
Sbjct: 480 ARKFLITELRELVS 493
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 508 IKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQV----QTDLNSLRRRHSSLQEE 675
+++ ++ + E ++ ++LLE T +LK++ ELD+ +L L R ++++ E
Sbjct: 610 VRLQMSLLNEKYESVKSASELLETETETLKREKDELDKKCHIHLEELEKLVLRLTNVESE 669
Query: 676 AEALRVLTDQLK 711
A + L D LK
Sbjct: 670 ALEAKKLVDSLK 681
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/79 (27%), Positives = 44/79 (55%)
Frame = +1
Query: 511 KVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALR 690
KV+F+ +K + +LQ K LE + SLK ++ + T+LN + + SL+ + L
Sbjct: 980 KVSFEALKHYSYELQHKNHDLELLCDSLKLRNDNISVENTELNK-KLNYCSLR--IDELE 1036
Query: 691 VLTDQLKKCLNMTTKISLL 747
+ + L++ N+T+ +S +
Sbjct: 1037 IQLENLQQ--NLTSFLSTM 1053
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -1
Query: 271 CHIIRNVVDDGAVADLLIRGAAAETGGPFRKGLV 170
C ++ V D G VA L G AA++G PF++GL+
Sbjct: 365 CDVVIAVPDSGVVAAL---GYAAKSGVPFQQGLI 395
>At2g14045.2 68415.m01562 expressed protein
Length = 122
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQS 445
D + ++N+LL KH++ E +K H S + + +ET ++
Sbjct: 70 DLQIKYNELLAKHQETLRELNGVKSLHSRNSSKDDADRETLEA 112
>At2g14045.1 68415.m01561 expressed protein
Length = 122
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQS 445
D + ++N+LL KH++ E +K H S + + +ET ++
Sbjct: 70 DLQIKYNELLAKHQETLRELNGVKSLHSRNSSKDDADRETLEA 112
>At3g59200.1 68416.m06600 F-box family protein contains F-box domain
Pfam:PF00646
Length = 520
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +2
Query: 263 NVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
N+ +E +A K P K FN L+E H ++ D D + + E Q
Sbjct: 236 NLVYLEYSDAIASKYP----KVNFNSLVEAHIGLRLTEDQSGDADFSEEDYFSEGDEKKQ 291
Query: 443 SCSNERDILKANLSVKTL 496
N D LK +V+ L
Sbjct: 292 MVGNATDFLKGISTVQIL 309
>At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin
motor protein - Ustilago maydis, PID:g2062750; identical
to cDNA MKRP2 mRNA for kinesin-related protein
GI:16902293, kinesin-related protein [Arabidopsis
thaliana] GI:16902294
Length = 1055
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 520 FDVMKTENEDLQRKTKLLEE----VTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEAL 687
FD + EDL+ + ++ ++ + +L +K F D+ + +RR +L+ + +
Sbjct: 856 FDAWNLDPEDLKMELQVRKQREVALESALAEKEFIEDEYRKKAEEAKRREEALENDLANM 915
Query: 688 RVLTDQLKK 714
VL +LKK
Sbjct: 916 WVLVAKLKK 924
>At3g12930.1 68416.m01611 expressed protein contains Pfam domain
PF02410: Domain of unknown function DUF143
Length = 238
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSV 487
D F+DL K+ K+ TD+K EV D+ E + + D+ ++ V
Sbjct: 85 DTDEMFDDLFNKYGKVVFRSTDVKSPTAEVDDDAESLAFAVELAKVASDVKAGDIKV 141
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 323 KARFNDLLEKHKKMK-SEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE 499
++R L E+ KK++ E DLK K EVS E +K + ++S + + NL + L+
Sbjct: 660 RSRIQRLEERVKKLELMELDDLKSKLEEVSLERKKSDDAYRSRVYQLEECFKNLELMVLD 719
Query: 500 Y 502
+
Sbjct: 720 F 720
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +2
Query: 224 EICNCTIIDNIPNNVTKVEKRSTVAP--------KIPPYDFKARFNDLLEKHKKMKSEFT 379
E+ N + +N+TK E+RS K+ +A +EK K +K+
Sbjct: 824 EMANLENREASADNITKTEQRSNEDRIKQLEGQIKLKENALEASSKIFIEKEKDLKNRIE 883
Query: 380 DLKDKHLEVSDEYEKIKETFQ 442
+L+ K EVS ++ ET Q
Sbjct: 884 ELQTKLNEVSQNSQETDETLQ 904
>At5g13950.1 68418.m01631 expressed protein
Length = 939
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 374 FTDLKDKHLEVSDEYEKIKETFQSCSN-ERDILK 472
+++L+ H ++ D + +KE ++SC + E+DI+K
Sbjct: 181 YSNLEKYHQDIIDYLQTLKEKWESCKDPEKDIVK 214
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 571 LEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQLKK 714
LE V +L + E + +L++LR SLQ++ + RVL D K
Sbjct: 243 LETVRAALTRAEKEKSSILENLSTLRGHSKSLQDQLSSSRVLQDDAIK 290
>At3g53560.1 68416.m05914 chloroplast lumen common family protein
Length = 340
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 90 QFHNRPISRTIANGLSDVDKKNLITNHTRPLRN--GPPVSAAAPRIKRSAT-APSSTTFR 260
Q H++P + + S KNL + +P+ + + A++ + + S T P ST FR
Sbjct: 8 QLHHQPFHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTPFR 67
Query: 261 I 263
+
Sbjct: 68 L 68
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2
protein, Xenopus laevis, PIR:T30335
Length = 1229
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 347 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLS 484
E+ KKM +L+++ E+ DE EK+ +++ E+D LK LS
Sbjct: 806 EEQKKM---IGNLENQLTEMHDENEKLMSLYENAMKEKDELKRLLS 848
>At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related
protein, putative similar to kinesin like protein
GB:CAB10194 from [Arabidopsis thaliana]
Length = 1313
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = +2
Query: 344 LEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
++ H +M ++ DL++KH+++ + +I+E
Sbjct: 1101 MQGHARMIEQYADLEEKHIQLLARHRRIRE 1130
>At2g33780.1 68415.m04143 VQ motif-containing protein contains
PF05678: VQ motif
Length = 204
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 24 ETIRKMSKIPKLPTISKENRFGQFHNRPISRTIANGLSD-----VDKKNLITNH--TRPL 182
+ ++ ++ IPK PT + RF FH+ P + + N +++N + ++ P
Sbjct: 48 QVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERRNSMKHYLNINPT 107
Query: 183 RNGPP 197
+GPP
Sbjct: 108 HSGPP 112
>At1g20530.1 68414.m02558 hypothetical protein
Length = 614
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 290 TVAPKIPP---YDFKARFNDLLEKHK-KMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNE 457
T+ P PP ++ F + E ++ ++ DLKD+ S E +K+K+ + S
Sbjct: 138 TITPPPPPPAPSNYAWDFINFFESYELPYTTDVNDLKDRETTPSHEEDKLKKKKITVSQN 197
Query: 458 RDILKANLSVKTLEYDE 508
+ +K KTL E
Sbjct: 198 DEKIKVEEEKKTLRISE 214
>At1g03960.1 68414.m00381 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand
Length = 529
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Frame = +3
Query: 15 PAVETIRKMSKIPKLPT-ISKENRFGQFHNRPISRTIANGLSDVDKKNLITNHTRPL--- 182
P + + +S P PT + ++ F Q+ + P + T+ L D K TN ++ L
Sbjct: 15 PELLQLPGLSPSPLKPTSLIADDLFSQWLSLPETATLVKSLIDDAKSGTPTNKSKNLPSV 74
Query: 183 ---RNGPPVS----AAAPRIKRSATAPSSTTFRIM*QKLKKDQL 293
+ PP+S + +PR R T+P S + K K QL
Sbjct: 75 FLSSSTPPLSPRSSSGSPRFSRQRTSPPSLHSPLRSLKEPKRQL 118
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +2
Query: 263 NVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
++ ++K S YD R N++L +E +D +DK ++V+DE E ++ +
Sbjct: 490 HIKNLKKTSNHQYSDDSYDVGPRSNNVLFPSS---NESSDCEDKVMDVTDELEFQEKEIE 546
Query: 443 SCSNERDILKANLSVKTLE 499
CS + K ++ +K L+
Sbjct: 547 HCSLQE---KLDMELKELD 562
>At5g56160.1 68418.m07006 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and SEC14 cytosolic
factor (SP:P45816) [Candida lipolytica]
Length = 592
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +2
Query: 278 EKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKI 427
++++TV +P + + ++ KKM+ EFT++ K +++ + EK+
Sbjct: 496 QRQNTVV--VPDSSTNNKVLECFDRLKKMEKEFTEISRKQVKIPEANEKL 543
>At5g28760.1 68418.m03532 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 520
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/76 (23%), Positives = 29/76 (38%)
Frame = +2
Query: 248 DNIPNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKI 427
DN+P V V +PP++ +D+ E E ++ K +E D + I
Sbjct: 429 DNVPPYEENVNVEKDVGENVPPFEENVNVDDMTE-----GVETEGVETKGVETEDVGKSI 483
Query: 428 KETFQSCSNERDILKA 475
K C D +A
Sbjct: 484 KRYVGKCKGTNDETEA 499
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 523 DVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTD 702
DV+K E E + ++ +E V ++ EL++ D+N + SL +E E LR
Sbjct: 252 DVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEI---VESLTKEREGLRGQVV 308
Query: 703 QLKKCLNMTTK 735
L+K L+ T+
Sbjct: 309 GLEKSLDEVTE 319
>At4g26660.1 68417.m03841 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333
Length = 806
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 523 DVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTD 702
+++K EN++L+ + + E + + L + + L R S ++EE E L+ +
Sbjct: 673 ELLKKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEERFSVVEEEKERLKKQME 732
Query: 703 QLK 711
QLK
Sbjct: 733 QLK 735
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 529 MKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAEALRVLTDQL 708
++ E E + + KLL+E + + ELD ++ +SL+ + E E V ++L
Sbjct: 664 LEREREQISVRKKLLKEQEAEMHKDITELDVLR---SSLKEKRKEFICERERFLVFLEKL 720
Query: 709 KKC 717
K C
Sbjct: 721 KSC 723
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 347 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 508
E +K + S+ + + E DEY K+ ++ +IL+ L ++LEY E
Sbjct: 467 ENYKNVSSKLEQQECSNAE--DEYLDSKDIIDELKSQIEILEGKLKQQSLEYSE 518
>At5g48520.1 68418.m05999 expressed protein similar to unknown
protein (gb|AAB97010.1)
Length = 671
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 574 EEVTFSLKQKSFELD-QVQTDLNSLRRRHSSLQEEAEAL 687
+ + +LK + ++ + DL+SLRR+H+ L EE L
Sbjct: 347 QAILLTLKSQVTSVEAHIHFDLHSLRRKHADLVEEISTL 385
>At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q06138
MO25 protein {Mus musculus}; contains Pfam profile
PF03204: Mo25 protein family
Length = 345
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKI 427
D + F DLL KH + SEF L + E D YE++
Sbjct: 186 DAFSTFKDLLTKHDSVVSEF--LTSHYTEFFDVYERL 220
>At5g15040.1 68418.m01763 paired amphipathic helix repeat-containing
protein contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 87
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 317 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 442
+ K F+D +EK+ K+ DLK + + + ++KE F+
Sbjct: 10 EVKDTFHDQIEKYDMFKNILLDLKARRIGRHTAFAQLKELFK 51
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 407 SDEYEKIKETFQSCSNERDILKANLSVKTLEYD 505
+DE EK KE +S SNE+ K N S EYD
Sbjct: 106 TDEEEKRKEGERSESNEKKKQKRNRSQSHSEYD 138
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 538 ENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLNSLRRRHSSLQEEAE 681
+ ++ K K EE SL+QK E+D+ T L H SL ++E
Sbjct: 203 QESEVMEKLKSAEE---SLEQKGREIDEATTKRMELEALHQSLSIDSE 247
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 281 KRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKE 433
KRS A + Y+ + R L+EKH++ S + K ++S EK ++
Sbjct: 498 KRSMDAELVDKYNKEKRAKSLVEKHREDSSSSSSRLKKKKKLSSSKEKTEK 548
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,523,691
Number of Sequences: 28952
Number of extensions: 222723
Number of successful extensions: 980
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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