Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1514
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   9.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
 Frame = +3

Query: 84  AVPYQLAVNYCSRIAHIL--LLNSVFFCEHYLTFGLGRIDQ*FISSVSSPKLITLFQ*DT 257
           AVPY     YC R   +     +      +   FGL   +  F   V  PK IT F    
Sbjct: 249 AVPYVPFYRYCYRPYPVYNQWWSGPLSMYYQYPFGLPEYEYSFYQEVKKPKKITDFSISA 308

Query: 258 GVFDC 272
            + DC
Sbjct: 309 IMKDC 313


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 336 TLSLKVDSNVRRWRY 380
           TL + +DS + +WRY
Sbjct: 133 TLLMDIDSLITKWRY 147


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 336 TLSLKVDSNVRRWRY 380
           TL + +DS + +WRY
Sbjct: 293 TLLMDIDSLITKWRY 307


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 336 TLSLKVDSNVRRWRY 380
           TL + +DS + +WRY
Sbjct: 293 TLLMDIDSLITKWRY 307


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 435 VLIFHSGLSYSLTQSMAFYTSTFS 364
           V+IF+S LSY  ++ +    S F+
Sbjct: 170 VMIFNSALSYKASEIVVMLRSRFA 193


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 435 VLIFHSGLSYSLTQSMAFYTSTFS 364
           V+IF+S LSY  ++ +    S F+
Sbjct: 188 VMIFNSALSYKASEIVVMLRSRFA 211


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 825 ILCFISLIWYLYN 863
           I CF+ L++Y+Y+
Sbjct: 6   IACFLLLLYYIYS 18


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 46  ILLKNYIHNIIWWLFHINLLLIIV 117
           ++L+   +N  +WLFH + L  IV
Sbjct: 655 VVLRLRANNPGFWLFHCHFLFHIV 678


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +3

Query: 288 VVCAC*AKTR*SFGSKTLSLK----VDSNVRRWRY 380
           ++  C + T  SFGSKT+  +     +S +R+ RY
Sbjct: 38  ILTTCESNTDFSFGSKTIDFRKIQCSNSPLRKARY 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,951
Number of Sequences: 336
Number of extensions: 4591
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)