Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1514
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   9.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 217  TLLMNYWSILPKPNVR*CSQKNTEFNNKM 131
            TL  N WS + +P      QK    NNKM
Sbjct: 1642 TLFGNVWSSIRRPGPFGSKQKWNSNNNKM 1670


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 497 RLVTFAFSVLIKCLTKLFD 553
           +LVTF F+VL+ C   L D
Sbjct: 2   KLVTFVFAVLVCCSMTLGD 20


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 131 VSYSGTIINSKLIWNSH 81
           + Y G +I+++L W SH
Sbjct: 751 IRYLGVVIDNQLSWKSH 767


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,053
Number of Sequences: 2352
Number of extensions: 17800
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)