Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1513
(758 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17JG5 Cluster: Mitochondrial ribosomal protein, S18B, ... 141 1e-32
UniRef50_Q9VIN9 Cluster: CG10757-PA, isoform A; n=2; Diptera|Rep... 139 8e-32
UniRef50_UPI00015B4C10 Cluster: PREDICTED: similar to CG10757-PA... 137 2e-31
UniRef50_Q3KQG7 Cluster: MGC130639 protein; n=2; Xenopus laevis|... 104 2e-21
UniRef50_Q9Y676 Cluster: 28S ribosomal protein S18b, mitochondri... 104 3e-21
UniRef50_Q566S7 Cluster: Mitochondrial ribosomal protein S18B; n... 98 2e-19
UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma j... 96 1e-18
UniRef50_Q4RD00 Cluster: Chromosome undetermined SCAF17702, whol... 85 2e-15
UniRef50_Q5STN0 Cluster: Mitochondrial ribosomal protein S18B; n... 64 4e-09
UniRef50_Q22470 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_A7RW82 Cluster: Predicted protein; n=1; Nematostella ve... 58 3e-07
UniRef50_UPI0000E4815D Cluster: PREDICTED: hypothetical protein;... 55 2e-06
UniRef50_Q2C775 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82
UniRef50_Q1J6Q1 Cluster: Sensor kinase dpiB; n=13; Streptococcus... 35 2.5
UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondri... 35 2.5
UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.8
UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex... 33 5.8
>UniRef50_Q17JG5 Cluster: Mitochondrial ribosomal protein, S18B,
putative; n=2; Endopterygota|Rep: Mitochondrial
ribosomal protein, S18B, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 208
Score = 141 bits (342), Expect = 1e-32
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +3
Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
DRT++IPVE S+RYLAS+AY TY PVW YRRNHKG PP++TRK+C+R G ++TGN
Sbjct: 69 DRTRIIPVETSIRYLASEAYQQTYQGEPVWKQYRRNHKGVYPPKQTRKTCIRQGKLATGN 128
Query: 435 PCPICRDEYLVLDHRNTKLLQQFIS 509
PCPICRDE+LVLDHRNT L++QF+S
Sbjct: 129 PCPICRDEFLVLDHRNTDLIKQFVS 153
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2
Query: 515 TGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
+G++L TGLCQK+H ELLVA+ERA D GL+T+DVPFR YDYS Y
Sbjct: 156 SGKVLSYQITGLCQKRHLELLVAVERAMDYGLITFDVPFRDYDYSEY 202
>UniRef50_Q9VIN9 Cluster: CG10757-PA, isoform A; n=2; Diptera|Rep:
CG10757-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 204
Score = 139 bits (336), Expect = 8e-32
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +3
Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
DR+K IPVE S+RYL S AY TYGE+ VW YRRNHKG PRKTRK+C+R ISTGN
Sbjct: 62 DRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGN 121
Query: 435 PCPICRDEYLVLDHRNTKLLQQFIS 509
PCPICRDEYLVLD+RNT+LL+QFIS
Sbjct: 122 PCPICRDEYLVLDYRNTELLEQFIS 146
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
++G +L SKTGLCQK H L+VA+++A D G LTYDVPFR YDYS Y
Sbjct: 148 HSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEY 195
>UniRef50_UPI00015B4C10 Cluster: PREDICTED: similar to CG10757-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG10757-PA - Nasonia vitripennis
Length = 208
Score = 137 bits (332), Expect = 2e-31
Identities = 63/106 (59%), Positives = 75/106 (70%)
Frame = +3
Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
DR+KVIPVE S+ YL S+AY YG++PVW YRRN KG P +TRK+CVRN +I+T N
Sbjct: 64 DRSKVIPVETSISYLESEAYKLAYGDDPVWKHYRRNFKGQFAPTRTRKTCVRNKVITTSN 123
Query: 435 PCPICRDEYLVLDHRNTKLLQQFISIILDRFYNLQRQAYARKNTKN 572
PCPICRDEYLVLDHRNTKLL QFIS ++ RK +N
Sbjct: 124 PCPICRDEYLVLDHRNTKLLNQFISPYNGELLQTKKTGLCRKQHEN 169
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKSTASHQN 682
Y G++LQ KTGLC+K+H+ L VAI RA D G +++DVPFR YDYS + A N
Sbjct: 150 YNGELLQTKKTGLCRKQHENLEVAIYRAKDYGTISFDVPFRTYDYSEWYNPEAESNN 206
>UniRef50_Q3KQG7 Cluster: MGC130639 protein; n=2; Xenopus
laevis|Rep: MGC130639 protein - Xenopus laevis (African
clawed frog)
Length = 222
Score = 104 bits (250), Expect = 2e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +3
Query: 279 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 458
+Q YL S+ Y+ YG+ +W YRRNHKG IPP+KTRK+C+R G + GNPCPICRDE
Sbjct: 48 DQPWEYLNSEEYLQRYGQKSIWADYRRNHKGPIPPQKTRKTCIRGGKV-CGNPCPICRDE 106
Query: 459 YLVLDHRNTKLLQQFI 506
L L ++N KLLQQFI
Sbjct: 107 KLGLHYKNVKLLQQFI 122
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKS 664
+TG + P+ TG+C K+ K L+ I A D G L VP+ V + Y S
Sbjct: 125 HTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLPAHVPYIVLPHEDYLNS 175
>UniRef50_Q9Y676 Cluster: 28S ribosomal protein S18b, mitochondrial
precursor; n=25; Theria|Rep: 28S ribosomal protein S18b,
mitochondrial precursor - Homo sapiens (Human)
Length = 258
Score = 104 bits (249), Expect = 3e-21
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = +3
Query: 279 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDE 458
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+R + GNPCPICRD
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDH 111
Query: 459 YLVLDHRNTKLLQQFI 506
L +D RN KLL+QF+
Sbjct: 112 KLHVDFRNVKLLEQFV 127
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVP 628
+TG I TG+C K+HK L AI++A D GLL Y +P
Sbjct: 130 HTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIYHIP 168
>UniRef50_Q566S7 Cluster: Mitochondrial ribosomal protein S18B; n=3;
Danio rerio|Rep: Mitochondrial ribosomal protein S18B -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 242
Score = 98.3 bits (234), Expect = 2e-19
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +3
Query: 294 YLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDEYLVLD 473
YL S+ Y+ YG PVW YRRNHKGGIPP+KTRK+C+R G NPCPICRD +++
Sbjct: 72 YLKSEEYIERYGTKPVWTNYRRNHKGGIPPQKTRKTCIR-GDKKCANPCPICRDPNIIIH 130
Query: 474 HRNTKLLQQF 503
++N LLQQF
Sbjct: 131 YKNVNLLQQF 140
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 515 TGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYD---VPFRVYDYS 649
TG + P+ TG+C K+ K L AIE A D GLL V F DYS
Sbjct: 145 TGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLLRAQFAHVDFTKEDYS 192
>UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09615 protein - Schistosoma
japonicum (Blood fluke)
Length = 228
Score = 95.9 bits (228), Expect = 1e-18
Identities = 43/95 (45%), Positives = 56/95 (58%)
Frame = +3
Query: 285 SLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDEYL 464
S+ Y S + +TY PVW YRRN+ G PP TRKSCV G + + NPCPICRDEYL
Sbjct: 83 SIEYFNSDVFRNTYKGKPVWFYYRRNYGGHFPPSVTRKSCVHLGKLVSSNPCPICRDEYL 142
Query: 465 VLDHRNTKLLQQFISIILDRFYNLQRQAYARKNTK 569
VL H++ +LL+ FI+ Y + R+ K
Sbjct: 143 VLHHQHIELLKHFINPDSFEIYPSSKTGICRRQEK 177
Score = 39.5 bits (88), Expect = 0.088
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 521 QILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
+I SKTG+C+++ K L +E+A D G + +PF +Y+Y+ Y
Sbjct: 162 EIYPSSKTGICRRQEKILQQEVEKARDLGYIQIWLPFYLYNYNDY 206
>UniRef50_Q4RD00 Cluster: Chromosome undetermined SCAF17702, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF17702, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 242
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +3
Query: 351 YRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDEYLVLDHRNTKLLQQFIS 509
YRRNHKG IPP+KTRK+C R I GNPCPICRD +V+ H+N KLLQQFIS
Sbjct: 91 YRRNHKGAIPPQKTRKTCTRGDKIC-GNPCPICRDRNIVVHHQNVKLLQQFIS 142
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKS 664
+TG +L P++TG+C K+ K+LL AI A + GLL VPF + Y+ S
Sbjct: 144 HTGLVLDPTRTGVCMKQQKKLLEAIVTAQNHGLLLVHVPFVDFSEEDYSSS 194
>UniRef50_Q5STN0 Cluster: Mitochondrial ribosomal protein S18B; n=1;
Homo sapiens|Rep: Mitochondrial ribosomal protein S18B -
Homo sapiens (Human)
Length = 215
Score = 64.1 bits (149), Expect = 4e-09
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +3
Query: 279 EQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCV 407
++ +YL S+ Y YG PVW YRRNHKGG+PP++TRK+C+
Sbjct: 53 DEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCI 95
>UniRef50_Q22470 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 238
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +3
Query: 276 VEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGI---PPRKTRKSCV-RNGMISTGNPCP 443
+ + + Y+ S+ Y Y P++ Y+RN KG PP R C+ ++G + + CP
Sbjct: 54 IAEQISYMKSRGYAEAYKGLPIYRWYKRNIKGQSKLQPP--PRLFCIDKHGRFNLNHACP 111
Query: 444 ICRDEYLVLDHRNTKLLQQFISIILDRFYNLQRQAYARKN---TKNSWLLLKELGT 602
+CRDEYL D+RN L++QF++ D+ ++ + R+ + L KE GT
Sbjct: 112 VCRDEYLYFDYRNPGLIEQFLADGTDQPIDILKSGLCREQYTLLRAQLLKAKEHGT 167
Score = 36.7 bits (81), Expect = 0.62
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 515 TGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKS 664
T Q + K+GLC++++ L + +A + G +T+ V FR +DY + KS
Sbjct: 136 TDQPIDILKSGLCREQYTLLRAQLLKAKEHGTITFGVEFRNFDYRQWYKS 185
>UniRef50_A7RW82 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 244
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +3
Query: 336 PVWLLYRRNHKGGIPPRKTRKSCVR-NGMISTGNPCPICR---DEYLVLDHRNTKLLQQF 503
P W YRRNHKG IPP++TR C + + T NPCP+CR ++ + ++ L QF
Sbjct: 119 PAWAGYRRNHKGQIPPKRTRLRCTTIDKQLLTQNPCPVCRIRVEKNYEISSKDVSFLTQF 178
Query: 504 IS 509
+S
Sbjct: 179 MS 180
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDV 625
+TG+IL KTG+C+++ K+LL AIE A D+G L + +
Sbjct: 182 HTGEILHTGKTGVCRQQQKKLLHAIEEAQDKGYLPFTI 219
>UniRef50_UPI0000E4815D Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 111
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 387 KTRKSCVR-NGMIST--GNPCPICRDEYLVLDHRNTKLLQQFISIILDRFYNLQRQAYAR 557
+TRK C+R NG GNPCPICRD LVL ++N KLL+QFI Y+ R R
Sbjct: 3 ETRKRCIRGNGEKQQICGNPCPICRDSNLVLHYKNIKLLEQFICPHSWNIYSTYRTGLCR 62
Query: 558 KNTK 569
+ K
Sbjct: 63 RQHK 66
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKSTAS 673
++ I +TGLC+++HK L IE+A G+L + VP+ Y Y Y + S
Sbjct: 48 HSWNIYSTYRTGLCRRQHKALCATIEKARQYGVLPFSVPYIEYKYEDYYQDETS 101
>UniRef50_Q2C775 Cluster: Putative uncharacterized protein; n=1;
Photobacterium sp. SKA34|Rep: Putative uncharacterized
protein - Photobacterium sp. SKA34
Length = 647
Score = 36.3 bits (80), Expect = 0.82
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 364 IKVVYLLEKQGNLVLETG*FQQEILVLFVEMNIWY*ITETLSYFNNSFQLY 516
I+ +Y+ +K NL+LE G F++EI+ VE N+W I T + +N+ Q Y
Sbjct: 149 IRTLYI-DKNNNLILENGEFKKEIIYQGVENNVWKNIIITRT--DNNLQAY 196
>UniRef50_Q1J6Q1 Cluster: Sensor kinase dpiB; n=13;
Streptococcus|Rep: Sensor kinase dpiB - Streptococcus
pyogenes serotype M4 (strain MGAS10750)
Length = 513
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 176 DLKSGRVLFNLKRSTLNSAIFFNFRNYVLMLTYFKLISFFITSSVNF 36
D + G + +K +TLN + RNY L L LIS +TS ++F
Sbjct: 146 DKQIGAIAVGIKLTTLNDVALTSKRNYTLSLLLCLLISLLVTSFISF 192
>UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondrial
precursor; n=11; Theria|Rep: 28S ribosomal protein S18c,
mitochondrial precursor - Homo sapiens (Human)
Length = 142
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLL--TYDVPFRVYDYSVYN 658
+TG I TGLC KK KE+ AI+RA G + TY P + D V N
Sbjct: 87 FTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKVCN 137
>UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 158
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 509 NYTGQILQPSKTGLCQKKHKELLVAIERAWDQGLL 613
+++G+I TGLC KK KE+ AI+RA GL+
Sbjct: 108 SHSGRIYNRRVTGLCDKKQKEITNAIKRARAIGLM 142
>UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S18 - Aquifex
aeolicus
Length = 72
Score = 33.5 bits (73), Expect = 5.8
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 518 GQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDV 625
G+I +TGLC K + L V I+RA GLL Y V
Sbjct: 36 GRIKDRKQTGLCAKHQRRLAVQIKRARQLGLLPYVV 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,937,110
Number of Sequences: 1657284
Number of extensions: 13918656
Number of successful extensions: 38851
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 37207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38778
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -