Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1513
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075438-1|AAL68253.1|  204|Drosophila melanogaster LP10852p pro...   139   4e-33
AE014134-3207|AAN11068.1|  204|Drosophila melanogaster CG10757-P...   139   4e-33
AE014134-3206|AAF53877.1|  204|Drosophila melanogaster CG10757-P...   139   4e-33

>AY075438-1|AAL68253.1|  204|Drosophila melanogaster LP10852p
           protein.
          Length = 204

 Score =  139 bits (336), Expect = 4e-33
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = +3

Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
           DR+K IPVE S+RYL S AY  TYGE+ VW  YRRNHKG   PRKTRK+C+R   ISTGN
Sbjct: 62  DRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGN 121

Query: 435 PCPICRDEYLVLDHRNTKLLQQFIS 509
           PCPICRDEYLVLD+RNT+LL+QFIS
Sbjct: 122 PCPICRDEYLVLDYRNTELLEQFIS 146



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +2

Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
           ++G +L  SKTGLCQK H  L+VA+++A D G LTYDVPFR YDYS Y
Sbjct: 148 HSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEY 195


>AE014134-3207|AAN11068.1|  204|Drosophila melanogaster CG10757-PB,
           isoform B protein.
          Length = 204

 Score =  139 bits (336), Expect = 4e-33
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = +3

Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
           DR+K IPVE S+RYL S AY  TYGE+ VW  YRRNHKG   PRKTRK+C+R   ISTGN
Sbjct: 62  DRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGN 121

Query: 435 PCPICRDEYLVLDHRNTKLLQQFIS 509
           PCPICRDEYLVLD+RNT+LL+QFIS
Sbjct: 122 PCPICRDEYLVLDYRNTELLEQFIS 146



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +2

Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
           ++G +L  SKTGLCQK H  L+VA+++A D G LTYDVPFR YDYS Y
Sbjct: 148 HSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEY 195


>AE014134-3206|AAF53877.1|  204|Drosophila melanogaster CG10757-PA,
           isoform A protein.
          Length = 204

 Score =  139 bits (336), Expect = 4e-33
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = +3

Query: 255 DRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGN 434
           DR+K IPVE S+RYL S AY  TYGE+ VW  YRRNHKG   PRKTRK+C+R   ISTGN
Sbjct: 62  DRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGN 121

Query: 435 PCPICRDEYLVLDHRNTKLLQQFIS 509
           PCPICRDEYLVLD+RNT+LL+QFIS
Sbjct: 122 PCPICRDEYLVLDYRNTELLEQFIS 146



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +2

Query: 512 YTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVY 655
           ++G +L  SKTGLCQK H  L+VA+++A D G LTYDVPFR YDYS Y
Sbjct: 148 HSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEY 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,453,748
Number of Sequences: 53049
Number of extensions: 633666
Number of successful extensions: 2012
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)