Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1513
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   7.2  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   7.2  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   7.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.5  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 376 IPPL*LRRYNSHTGFSP*VCIY 311
           +P    R Y +HTG  P  C Y
Sbjct: 103 VPARLTRHYRTHTGEKPYQCEY 124


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 261 SCLSRINRWLLIGFIGSII 205
           SC  +I RW ++G  G+++
Sbjct: 434 SCSDKIARWNVLGVQGALL 452


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 401 RFPCFSRRYTTFMITPI 351
           ++P + R +T FM TP+
Sbjct: 57  KYPEYQRYFTAFMDTPL 73


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 401 RFPCFSRRYTTFMITPI 351
           ++P + R +T FM TP+
Sbjct: 57  KYPEYQRYFTAFMDTPL 73


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 713 KLKHCYSNYINSGGMQYF 660
           +L HC ++ ++  G+Q+F
Sbjct: 313 ELGHCTASVMDENGLQFF 330


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 92  LMLTYFKLISFFITSSV 42
           L+ TYF  I F + SSV
Sbjct: 293 LLGTYFNCIMFMVASSV 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,630
Number of Sequences: 438
Number of extensions: 4324
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)