Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1513
         (758 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase, putat...    30   1.9  
At4g10530.1 68417.m01725 subtilase family protein contains simil...    29   4.4  
At4g10520.1 68417.m01724 subtilase family protein contains simil...    29   4.4  
At3g06030.1 68416.m00688 NPK1-related protein kinase, putative (...    29   4.4  
At5g22940.1 68418.m02682 exostosin family protein contains Pfam ...    28   5.9  
At5g01440.1 68418.m00057 insulin-degrading enzyme-related contai...    28   7.7  
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain...    28   7.7  
At3g62350.1 68416.m07004 hypothetical protein                          28   7.7  

>At2g22230.1 68415.m02638 beta-hydroxyacyl-ACP dehydratase, putative
           similar to beta-hydroxyacyl-ACP dehydratase from
           Toxoplasma gondii [GI:3850997]; contains Pfam profile
           PF01377 Thioester dehydratase
          Length = 220

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +3

Query: 285 SLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKS----CVRNG-MISTGNPCPI 446
           S+ +L+S + +H +   P+ L   R+H   +PP K   S    C  NG   ST    PI
Sbjct: 7   SVLFLSSDSLIHHHHHQPLHLSSSRSHSVSLPPNKRSNSLTLRCSTNGDSTSTEKETPI 65


>At4g10530.1 68417.m01725 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 747

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
 Frame = +1

Query: 130 SVLRLRLNK-TLPDLRSSLRFYCSSTDNGPNESDEQPAVD-PTKTGPKLFQSNKV*DIWQ 303
           SVL L L   T+P+LR  +    + T+ GP  S  +  +D PT     +  +  V D   
Sbjct: 637 SVLDLNLPSITIPNLRGEVTLTRTVTNVGPVNSVYKVVIDPPTGVNVAVTPTELVFDSTT 696

Query: 304 VKR---ICIPTV-KIQCGYYIG 357
            KR   + + T  K+  GYY G
Sbjct: 697 TKRSFTVRVSTTHKVNTGYYFG 718


>At4g10520.1 68417.m01724 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 756

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
 Frame = +1

Query: 130 SVLRLRLNK-TLPDLRSSLRFYCSSTDNGPNESDEQPAVD-PTKTGPKLFQSNKV*DIWQ 303
           SVL L L   T+P+LR  +    + T+ GP  S  +  +D PT     +  +  V D   
Sbjct: 646 SVLDLNLPSITIPNLRGEVTLTRTVTNVGPVNSVYKVVIDPPTGINVAVTPAELVFDYTT 705

Query: 304 VKR---ICIPTV-KIQCGYYIG 357
            KR   + + T  K+  GYY G
Sbjct: 706 TKRSFTVRVSTTHKVNTGYYFG 727


>At3g06030.1 68416.m00688 NPK1-related protein kinase, putative
           (ANP3) similar to protein kinase [Nicotiana tabacum]
           gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
           protein kinase 3 GI:2342426
          Length = 651

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 166 DLRSSLRFYCSSTDNGPNESDEQPAVDPTKTGPKLFQSNKV 288
           DL  S    C STDN   + DE P V  +K+    +Q++++
Sbjct: 433 DLNKSFNPMCDSTDNWSCKFDESPKVMKSKSNLLSYQASQL 473


>At5g22940.1 68418.m02682 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 469

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 128 NSAIFFNFRNYVLMLTYFKLISFFITS 48
           N  IFF FRNY   + +F L  +F TS
Sbjct: 36  NIFIFFFFRNYYTWILWFCLSLYFFTS 62


>At5g01440.1 68418.m00057 insulin-degrading enzyme-related contains
           weak similarity to Swiss-Prot:P14735 insulin-degrading
           enzyme (Insulysin) (Insulinase) (Insulin protease) [Homo
           sapiens]
          Length = 307

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +3

Query: 477 RNTKLLQQFISIILDRFYN-LQRQAYARKNTKNSWLLLKELGTKVCLHMMYHSEYMIIQF 653
           R T LL  F+SII D  YN L+ +       +    L+  +G  VC+    ++   +++ 
Sbjct: 45  RQTALLNLFVSIISDSVYNKLRIEEKLGYLVECETRLIHGVGFYVCVVSSDYNPCHLVRR 104

Query: 654 ITKVLHPTRIDVIRIAMFE 710
           I K ++  R++ +   MF+
Sbjct: 105 IYKFMNGIRLEGLFDKMFK 123


>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
           protein / lipid-binding START domain-containing protein
           contains Pfam profiles PF01852: START domain, PF00169:
           PH domain
          Length = 718

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
 Frame = +2

Query: 494 STIHFNYTGQILQPSKTGLCQKKHKELLVAIE--------RAWDQGLLTYDVPFRVYDYS 649
           S IH  Y   +L+P      +KK ++  V I+        R  D+GL T+     VY  S
Sbjct: 21  SYIHMRYF--VLEPRLLAYYKKKPQDYQVPIKTMLIDGNCRVEDRGLKTHH-GHMVYVLS 77

Query: 650 VYNKSTASHQ 679
           VYNK   SH+
Sbjct: 78  VYNKKEKSHR 87


>At3g62350.1 68416.m07004 hypothetical protein
          Length = 228

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 478 ETLSYFNNSFQLYWTDFTTFKDRLMPEKTQRTLGC 582
           +T  Y N S   +WT FT++K R+  E   + L C
Sbjct: 77  QTPVYANGSL-FWWTTFTSWKYRIFSELPSQILAC 110


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,582
Number of Sequences: 28952
Number of extensions: 313040
Number of successful extensions: 856
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)