Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1512
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.30 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.30 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   6.5  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 335 VKSNNYLQG-KSLIKLIRQHSTTKHNFLTSLISSRYLRSTKLLAPIIIL 192
           + ++NYL    S I L    S +  N  +S +   Y+R+T ++  III+
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIM 79


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 335 VKSNNYLQG-KSLIKLIRQHSTTKHNFLTSLISSRYLRSTKLLAPIIIL 192
           + ++NYL    S I L    S +  N  +S +   Y+R+T ++  III+
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIM 79


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 414 FVALYNLFLNRLLYCKTFQRVIDMYEIYFAINLKTYFCLHHFFTNALVLP 563
           F   + +F   LL+C  F        I+F ++L    CL +F  + L LP
Sbjct: 169 FFCAFIIFTMHLLFCCAF--------IFFNMHLLFLLCLDYFTLHLLFLP 210



 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +3

Query: 492 IYFAINLKTYFCLHHFFTNALVLPLSKITPKPYMYF 599
           I F ++L    C++HFF   ++  +  +    +++F
Sbjct: 154 IIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 76  LYPYIHILSKAINK 117
           LYP +H++S+A+ +
Sbjct: 58  LYPSVHLISRALGE 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,319
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)