Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1510
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 498 RRTDTQPLLFEGTGLIVDKDNSLVLPI 578
           R++D +   FE TG  +DK  S+++PI
Sbjct: 368 RKSDVK-YTFEETGFTLDKGVSIMVPI 393


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 103 YQRNAFTILQIITRTRLWLNI 165
           Y +N +T+L  +T+  LW  +
Sbjct: 76  YVQNIYTVLTALTKKPLWFKL 96


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 103 YQRNAFTILQIITRTRLWLNI 165
           Y +N +T+L  +T+  LW  +
Sbjct: 76  YVQNIYTVLTALTKKPLWFKL 96


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 224 NLIVFAPSVLGLVDR 268
           N I F P VLGL+ R
Sbjct: 202 NCICFVPGVLGLLSR 216


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 224 NLIVFAPSVLGLVDR 268
           N I F P VLGL+ R
Sbjct: 202 NCICFVPGVLGLLSR 216


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 224 NLIVFAPSVLGLVDR 268
           N I F P VLGL+ R
Sbjct: 202 NCICFVPGVLGLLSR 216


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 224 NLIVFAPSVLGLVDR 268
           N I F P VLGL+ R
Sbjct: 202 NCICFVPGVLGLLSR 216


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 246 PCSVWWTGRQ*GHNQIHRRWRKPSYGW 326
           PCS+  T  Q    QIH++     Y W
Sbjct: 182 PCSINSTSSQPVGTQIHQQTNHTFYPW 208


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 441 SLISHIIVEVVYDCC 397
           SL  + I+ V++DCC
Sbjct: 239 SLFGYQIILVIFDCC 253


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 559 TAWFCLFYQ 585
           T +FCLFYQ
Sbjct: 93  TVFFCLFYQ 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,888
Number of Sequences: 336
Number of extensions: 4270
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)