Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1504X
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.47 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.3  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 491 AMYVAIKPCSRCTRPVVPTVSCWTPATVSPTP 586
           AM V  +   RC  P  PT  C  P+T+ P P
Sbjct: 188 AMLVFDRRSLRCVVP--PTEDCDVPSTIPPPP 217


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 325 IVTNWDAMEKIWHHTFYNELRVAPEEHPVLLT 420
           +VT+W   E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 525 QREHGLMATYMACXLNVANMIWVIF 451
           Q+ +  +A   AC L V  ++WVI+
Sbjct: 37  QKYYPSLAKCYACLLMVVKILWVIY 61


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 537 TGRVQREHGLMATYMACXLNVANMI 463
           TGR     G M ++ A  +++ANM+
Sbjct: 232 TGRYDETRGTMLSHFAYYVDMANML 256


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 197 GTRREEHHLLRNRP 156
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 527 TRPVVPTVSCWTPATVSPTP 586
           T  + PT++CW+  T SP P
Sbjct: 314 TTVMSPTINCWS-LTSSPPP 332


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 197 GTRREEHHLLRNRP 156
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 197 GTRREEHHLLRNRP 156
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +2

Query: 374 TMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFATFNXHAMY 499
           T SC+        C    PQ     E +  +   T+N H M+
Sbjct: 253 TPSCLETFHTLEKCRPDPPQNLVINESIIDLSQQTYNVHLMW 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,365
Number of Sequences: 336
Number of extensions: 3540
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)