Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1504X
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 165 2e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 165 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 165 3e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 118 2e-27
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 8e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 8e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 5e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 77 9e-15
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 59 3e-09
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 40 0.002
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.049
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.049
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 29 3.2
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 4.3
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 4.3
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.5
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 27 7.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 27 7.5
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 27 9.9
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 9.9
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 9.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 83/116 (71%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTV 164
Score = 130 bits (313), Expect = 9e-31
Identities = 75/139 (53%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 83/116 (71%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTV 164
Score = 128 bits (309), Expect = 3e-30
Identities = 73/139 (52%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC ++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 150
Score = 95.9 bits (228), Expect = 2e-20
Identities = 59/121 (48%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Frame = +2
Query: 155 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKEVSCPSNTP--SNTAS 328
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK +K P +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 329 SLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFATFNXHAMYVAI 508
+ M + + V+P + + + PKANREKMTQIMF TFN AMYVAI
Sbjct: 65 NWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 123
Query: 509 K 511
+
Sbjct: 124 Q 124
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 165 bits (401), Expect = 2e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT G+VLDSGDGV+HTV
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 164
Score = 131 bits (316), Expect = 4e-31
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHT 280
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 281 AKEVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREK 454
+K P ++ M + + V+P + + + PKANREK
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREK 119
Query: 455 MTQIMFATFNXHAMYVAIK 511
MTQIMF TFN AMYVAI+
Sbjct: 120 MTQIMFETFNTPAMYVAIQ 138
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 165 bits (400), Expect = 3e-41
Identities = 81/116 (69%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLD+GDGV+HTV
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTV 163
Score = 123 bits (296), Expect = 1e-28
Identities = 71/136 (52%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK +K
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P ++ M + + ++P + + + PK+NREKMTQ
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-IAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYV I+
Sbjct: 122 IMFETFNTPAMYVNIQ 137
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 118 bits (285), Expect = 2e-27
Identities = 58/118 (49%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Frame = +1
Query: 244 GTEGS-YVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTF-YNELRVAPEEHPVLL 417
G +G ++G +A S RG+ ++YP+EHGIV NW MEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 418 TEAPSTQGQQREDDPD-HVRNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
T+AP + RE + + QAVLSLYA+GRT G+VLDSGDGV+H V
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAV 167
Score = 57.6 bits (133), Expect = 6e-09
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG-------MGQKART*ETRHTA 283
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G +G KA E+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA---ESNRGL 67
Query: 284 KEVSCP-SNTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMT 460
+ P + N S + + W I + P + + + P NRE+
Sbjct: 68 FSIEYPMEHGIVNNWSDMEKI-WEY--IFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 461 QIMFATFNXHAMYVAIK 511
+I F TFN A+Y+ ++
Sbjct: 125 EIFFETFNVPALYIQMQ 141
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (259), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKI 357
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (259), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MC +EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKI 357
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (256), Expect = 8e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKI 357
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD MEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (256), Expect = 8e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 253
MC ++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAM 348
G + SYVGDEA SKRGIL LKYPIEHGIVTNWD M
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +1
Query: 229 RDGRYGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNE-LRVAPEEH 405
R G + VG+E R +L + YP+++GIV NWD M +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 406 PVLLTEAPSTQGQQREDDPDHVRNIQXARHVR-RHQAVLSLYASGRTNGIVLDSGDGVSH 582
+LLTE P RE + + QAVL+LYA G G+V+DSGDGV+H
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Score = 50.8 bits (116), Expect = 7e-07
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP------RHQGVMVGMGQKART*ETRHTAK 286
+VVDNG+G K G+AG + P +FPS+VGRP R + +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 287 EVSCP-SNTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
+++ P N + + FG P + + P L + P +NREKM Q
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFG--PEKLD-IDPKECKLLLTEPPLNPNSNREKMFQ 125
Query: 464 IMFATFNXHAMYVAIK 511
+MF + +++YVA++
Sbjct: 126 VMFEQYGFNSIYVAVQ 141
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.0 bits (181), Expect = 9e-15
Identities = 46/120 (38%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Frame = +1
Query: 259 YVGDEAHSKRGI-LPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
++GDEA S +KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRT--------NGIVLDSGDGVSHTV 588
+ RE + + + QAVL+L AS + G+V+DSGDGV+H +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCI 185
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 101 MCAEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
M A ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 313 IEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPSTQGQQREDDPDHV-RNIQXA 489
++ G++ +W+ EKI H++ N L P EHPVL +E+ +RE + + Q
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 490 RHVRRHQAVLSLYASGRTNGIVLDSG 567
+ VLS +A GRT+G+++DSG
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 33.9 bits (74), Expect = 0.086
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG---------RPRHQGVMVGMGQKART 262
+EV+ LV D GS + GFAG++ P+ PS + + + + G K +T
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 263 *ETRH---TAKEVSCPSNTPSNTASSLTGM--PWRRF-GIIPSTMSCV---SPPRNTLSC 415
++ ++ P + + G+ W F I+ + + +P + +
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 416 SLRLPQPKANREKMTQIMFATFNXHAMYVA 505
S +A REK+T+IMF F A Y++
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLS 158
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = +1
Query: 241 YGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLT 420
+G G +G AH+ G L+ P+EH I T + + +L P E P+L+
Sbjct: 66 HGQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQ 121
Query: 421 EAPSTQGQQREDDPDHVRNIQXARHVRRHQAVLS 522
+AP+T G P V N AR ++ HQA+ S
Sbjct: 122 QAPTTTGPGTPITPQRVPN---ARALQTHQAINS 152
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/94 (29%), Positives = 43/94 (45%)
Frame = +1
Query: 241 YGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLT 420
+G G +G AH+ G L+ P+E I T + + +L P E P+L+
Sbjct: 296 HGQHGQQLGAPAHTNGGTTRLQQPLEQWIQTTTQGVLQGKRE----QLEQGPTETPLLVQ 351
Query: 421 EAPSTQGQQREDDPDHVRNIQXARHVRRHQAVLS 522
+AP+T G P V N A ++ HQA+ S
Sbjct: 352 QAPTTTGPGTRITPQRVPN---APALQTHQAINS 382
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/96 (28%), Positives = 44/96 (45%)
Frame = +1
Query: 235 GRYGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVL 414
G++G G +G AH+ G L+ P++ I T + + +L P E P+L
Sbjct: 231 GQHGQHGLQLGAPAHTNGGTTRLQQPLDQRIQTTTQGVLQGKRE----QLEQGPTETPLL 286
Query: 415 LTEAPSTQGQQREDDPDHVRNIQXARHVRRHQAVLS 522
+ +AP+T G P V N A ++ HQ + S
Sbjct: 287 VQQAPTTTGPGTRITPQRVLN---APALQTHQVLNS 319
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.049
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 310 PIEHGIVTNWDAMEKIWHHTF 372
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.049
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 310 PIEHGIVTNWDAMEKIWHHTF 372
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -3
Query: 362 CQIFSMASQLVTMPC-SMGYLRGRIP---LLLCASSPTYEPSVPYRPSRPDG 219
CQ+FS QLVTM SMG ++ ++ L L AS + +P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 515 CSRCTRPVVPTVSCWTPATVSPTPC 589
C + T P PT S P T +P PC
Sbjct: 245 CLKPTTPAPPTTSTAPPPTTTPNPC 269
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 272 SSPTYEPSVP-YRPSRPDGGAFPR 204
SSPTY PS P Y P+ P G + P+
Sbjct: 1754 SSPTYTPSSPTYNPTSPRGFSSPQ 1777
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 272 SSPTYEPSVP-YRPSRPDGGAFPR 204
SSPTY PS P Y P+ P G + P+
Sbjct: 1761 SSPTYTPSSPTYNPTSPRGFSSPQ 1784
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 205 RGKAPPSGRDGRYGTEGS 258
RGKA +GRDGR G EG+
Sbjct: 216 RGKAGHTGRDGRPGLEGT 233
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 202 DRGKAPPS--GRDGRYGTEGSYVGDEAHSK 285
D G P G +GR G G YV EAH++
Sbjct: 101 DGGPGQPGLIGLNGRNGRNGKYVASEAHNE 130
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 180 ASSPAKPALHIPEPLSTTNAATSSAHI 100
+SSPA P++ P P +T++ +TSS I
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSSITI 678
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 180 ASSPAKPALHIPEPLSTTNAATSSAHI 100
+SSPA P++ P P +T++ +TSS I
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITI 679
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 180 ASSPAKPALHIPEPLSTTNAATSSAHI 100
+SSPA P++ P P +T++ +TSS I
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITI 679
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 180 ASSPAKPALHIPEPLSTTNAATSSAHI 100
+SSPA P++ P P +T++ +TSS I
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITI 679
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 155 KAGFAGDDAPRAVFPSIVGRPRHQG 229
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 307 YPIEHGIVTN-WDAMEKIWHHTFYNELRVAPEEHP 408
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 307 YPIEHGIVTN-WDAMEKIWHHTFYNELRVAPEEHP 408
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 362 IIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFATFNXHAMYVAIKPCSRCTRPVV 541
I P+T S V+ + ++R +A R ++ F + I R PV
Sbjct: 511 ISPTTSSGVADDKKA---TMRRRHDEARRRQLEHEQFTANRTLFNKIDIGAAPRIPSPVS 567
Query: 542 PTVSCWTP 565
PTVS W P
Sbjct: 568 PTVSSWQP 575
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 362 IIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFATFNXHAMYVAIKPCSRCTRPVV 541
I P+T S V+ + ++R +A R ++ F + I R PV
Sbjct: 511 ISPTTSSGVADDKKA---TMRRRHDEARRRQLEHEQFTANRTLFNKIDIGAAPRIPSPVS 567
Query: 542 PTVSCWTP 565
PTVS W P
Sbjct: 568 PTVSSWQP 575
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 238 RYGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNE 381
R+G+EG Y+G S G+ +K E I+ + A I+H F+ E
Sbjct: 173 RFGSEGGYIGS---SLGGVTVMKGENETDILASAKAWFMIYHLKFHPE 217
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 346 MEKIWHHTFYNELRVAPEEHPVLLTEAPSTQGQQREDDPDHVR 474
+ ++ H+T+++ + V+ E + AP G R DDPDH+R
Sbjct: 553 VRRLRHNTYFSSM-VSAMEVMAQIVLAPHLAG--RFDDPDHIR 592
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 346 MEKIWHHTFYNELRVAPEEHPVLLTEAPSTQGQQREDDPDHVR 474
+ ++ H+T+++ + V+ E + AP G R DDPDH+R
Sbjct: 553 VRRLRHNTYFSSM-VSAMEVMAQIVLAPHLAG--RFDDPDHIR 592
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 9.9
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = -2
Query: 348 HGIPVSDD-AVFDGVFEGQDTSFAVCLVSYVRAFCPIPTITP*WRGLPTIEGNTARGASS 172
H V+D AV DG+F G + F V V+ P TI T + +
Sbjct: 10507 HACTVTDSRAVVDGLFSGTEYVFRVVAVNGAGQSAPSDTIE------ATTQAEEEIDETV 10560
Query: 171 PAKPALHIPEPLS--TTNAATSSAH 103
P P + EP+S N S H
Sbjct: 10561 PTSPVEKVKEPVSKKPENTKESEGH 10585
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 9.9
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = -2
Query: 348 HGIPVSDD-AVFDGVFEGQDTSFAVCLVSYVRAFCPIPTITP*WRGLPTIEGNTARGASS 172
H V+D AV DG+F G + F V V+ P TI T + +
Sbjct: 10507 HACTVTDSRAVVDGLFSGTEYVFRVVAVNGAGQSAPSDTIE------ATTQAEEEIDETV 10560
Query: 171 PAKPALHIPEPLS--TTNAATSSAH 103
P P + EP+S N S H
Sbjct: 10561 PTSPVEKVKEPVSKKPENTKESEGH 10585
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 344 PWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKA 442
P+ F T+S SPP ++LS S +LP+ ++
Sbjct: 1177 PYALFPRPHETLSTASPPASSLSASAKLPKSES 1209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,155,157
Number of Sequences: 27780
Number of extensions: 352818
Number of successful extensions: 1423
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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