Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1504X
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 164 4e-41
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 164 4e-41
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 163 6e-41
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 163 6e-41
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 163 8e-41
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 163 8e-41
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 161 3e-40
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 161 3e-40
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 161 3e-40
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 152 2e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 137 6e-33
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 134 3e-32
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 97 6e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 77 1e-14
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 74 8e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 5e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 48 6e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 2e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 35 0.046
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 33 0.14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 30 1.3
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 30 1.3
At2g20950.4 68415.m02474 expressed protein 29 2.3
At2g20950.3 68415.m02473 expressed protein 29 2.3
At2g20950.2 68415.m02472 expressed protein 29 2.3
At2g20950.1 68415.m02471 expressed protein 29 2.3
At4g31620.1 68417.m04492 transcriptional factor B3 family protei... 29 3.0
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 4.0
At5g39270.1 68418.m04756 expansin, putative (EXP22) similar to e... 28 5.3
At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta... 28 5.3
At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta... 28 5.3
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 28 5.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.3
At1g63700.1 68414.m07209 protein kinase, putative contains prote... 27 9.3
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 9.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 164 bits (398), Expect = 4e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV+NWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 113 bits (272), Expect = 8e-26
Identities = 68/136 (50%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P S+ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNVPAMYVAIQ 139
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 164 bits (398), Expect = 4e-41
Identities = 82/116 (70%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV+NWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 113 bits (272), Expect = 8e-26
Identities = 68/136 (50%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P S+ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNTPAMYVAIQ 139
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 163 bits (397), Expect = 6e-41
Identities = 82/116 (70%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV NWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 112 bits (269), Expect = 2e-25
Identities = 67/136 (49%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P ++ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNTPAMYVAIQ 139
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 163 bits (397), Expect = 6e-41
Identities = 82/116 (70%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV NWD MEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 112 bits (269), Expect = 2e-25
Identities = 67/136 (49%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P ++ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNTPAMYVAIQ 139
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 163 bits (396), Expect = 8e-41
Identities = 81/116 (69%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV NWD MEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 112 bits (270), Expect = 1e-25
Identities = 67/136 (49%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P ++ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR-VAPEEHPILLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNAPAMYVAIQ 139
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 163 bits (396), Expect = 8e-41
Identities = 81/116 (69%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +1
Query: 244 GTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTE 423
G + +YVGDEA SKRGIL LKYPIEHGIV NWD MEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 424 APSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
AP RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 112 bits (270), Expect = 1e-25
Identities = 67/136 (49%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQK +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 VSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
P ++ M + + V+P + + + PKANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR-VAPEEHPILLTEAPLNPKANREKMTQ 123
Query: 464 IMFATFNXHAMYVAIK 511
IMF TFN AMYVAI+
Sbjct: 124 IMFETFNAPAMYVAIQ 139
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 161 bits (391), Expect = 3e-40
Identities = 79/112 (70%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 SYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
+YVGDEA SKRGIL LKYPIEHG+V+NWD MEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 110 bits (265), Expect = 6e-25
Identities = 64/137 (46%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Frame = +2
Query: 107 AEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAK 286
A+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QK +K
Sbjct: 4 ADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Query: 287 EVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMT 460
P S+ M + + ++P + + + PKANREKMT
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR-IAPEEHPVLLTEAPLNPKANREKMT 122
Query: 461 QIMFATFNXHAMYVAIK 511
QIMF TFN AMYVAI+
Sbjct: 123 QIMFETFNSPAMYVAIQ 139
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 161 bits (391), Expect = 3e-40
Identities = 79/112 (70%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 SYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
+YVGDEA SKRGIL LKYPIEHG+V+NWD MEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 110 bits (265), Expect = 6e-25
Identities = 64/137 (46%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Frame = +2
Query: 107 AEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAK 286
A+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QK +K
Sbjct: 4 ADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Query: 287 EVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMT 460
P S+ M + + ++P + + + PKANREKMT
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR-IAPEEHPVLLTEAPLNPKANREKMT 122
Query: 461 QIMFATFNXHAMYVAIK 511
QIMF TFN AMYVAI+
Sbjct: 123 QIMFETFNSPAMYVAIQ 139
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 161 bits (391), Expect = 3e-40
Identities = 79/112 (70%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 SYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
+YVGDEA SKRGIL LKYPIEHG+V+NWD MEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 54 AYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
RE + QAVLSLYASGRT GIVLDSGDGVSHTV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Score = 110 bits (265), Expect = 6e-25
Identities = 64/137 (46%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Frame = +2
Query: 107 AEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAK 286
A+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QK +K
Sbjct: 4 ADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Query: 287 EVSCPSNTP--SNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMT 460
P S+ M + + ++P + + + PKANREKMT
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR-IAPEEHPVLLTEAPLNPKANREKMT 122
Query: 461 QIMFATFNXHAMYVAIK 511
QIMF TFN AMYVAI+
Sbjct: 123 QIMFETFNSPAMYVAIQ 139
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 152 bits (368), Expect = 2e-37
Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 SYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
++VGDEA ++RGIL LKYPIEHG+V+NWD MEKIWHHTFYNELR+ PEEHP+LLTEAP
Sbjct: 55 TFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLN 114
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
RE + + QAVLSLY+SGRT GIVLDSGDGVSHTV
Sbjct: 115 PKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTV 166
Score = 99.5 bits (237), Expect = 1e-21
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKE 289
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +K A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 290 --VSCPSNTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQ 463
+S S+ M + + + P + + + PK NREKMTQ
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR-LEPEEHPILLTEAPLNPKVNREKMTQ 124
Query: 464 IMFATFNXHAMYVAIK 511
IMF +F +MY+ I+
Sbjct: 125 IMFESFAFPSMYIGIQ 140
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 137 bits (331), Expect = 6e-33
Identities = 71/121 (58%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +1
Query: 229 RDGRYGTEGSYVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHP 408
RDG E SYVG+E H+ R IL LK P+EHGIV NWD MEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNE-SYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 409 VLLTEAPSTQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHT 585
VLLTEAP RE + + Q+VL LY+SGRT G+VLD G+ VSHT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 586 V 588
V
Sbjct: 154 V 154
Score = 68.1 bits (159), Expect = 4e-12
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKEVSCPS 304
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ ++ E H +++
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR-DGL---NPNESYVGEEGHANRDILTLK 59
Query: 305 NTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFATFN 484
+ + + + + V P + + + PKANREKMTQIMF +F+
Sbjct: 60 DPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFD 119
Query: 485 XHAMYVAIK 511
AMYV+++
Sbjct: 120 VPAMYVSMQ 128
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 134 bits (325), Expect = 3e-32
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +1
Query: 259 YVGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPSTQ 438
+VGD+A ++ GIL L YP+EHG+V+NWD MEKIW+HTFY+ELRVAPEEHPVLLTEAP
Sbjct: 10 FVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNP 69
Query: 439 GQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
RE + QA LSL+ASGRT G VLDSGDGVS+ V
Sbjct: 70 KADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 97.5 bits (232), Expect = 6e-21
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = +1
Query: 262 VGDEAHSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPSTQG 441
VG+ R L + YP+ +GIV NWD ME +W H FYNEL++ P + +LLT+ P
Sbjct: 55 VGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPS 114
Query: 442 QQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDGVSHTV 588
+ RE + + A + QAVL+LYA G G+V+DSGDGV+H V
Sbjct: 115 KNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVV 164
Score = 50.0 bits (114), Expect = 1e-06
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKEVSCPS 304
+V DNG+G K GFAG++ P +VFP +VGRP + M Q+ + T E+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 305 NTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLP----QPKANREKMTQIMF 472
+ + + W + N C + L P NREKM + MF
Sbjct: 67 DINYPVHNGIV-QNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 473 ATFNXHAMYVAIK 511
+N +++ I+
Sbjct: 126 EKYNFAGVFIQIQ 138
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 76.6 bits (180), Expect = 1e-14
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Frame = +1
Query: 259 YVGDEAHSKR---GILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAP 429
Y+GDEA +K L YPIEHG V +WDAME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 430 STQGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTN-----GIVLDSGDGVSHTV 588
T + RE + + +VL+L A T+ G+V+D GDG +H V
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVV 187
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 73.7 bits (173), Expect = 8e-14
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +1
Query: 259 YVGDEAHS-KRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPST 435
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E P
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 436 QGQQREDDPDHV-RNIQXARHVRRHQAVLSLYASGRTNGIVLDSGDG 573
QQRE + + + VL+ +A+GR +V+D G G
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 211
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 232 DGRYGTEGSYVGDEA-HSKRGILPLKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHP 408
D G Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 409 VLLTEAPSTQGQQRE 453
+LL E P QQRE
Sbjct: 121 MLLAEPPLNSQQQRE 135
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 211
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 310 PIEHGIVTNWDAMEKIWHHTFYNELR-VAPEEHPVLLTEAPSTQGQQREDDPDHV-RNIQ 483
PIE G++ +WDAME + + Y L E +L T+ T RE +
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 484 XARHVRRHQAVLSLYASGRTNGIVLDSGDG 573
+ QAVLSLYA GR +G +D G G
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHG 146
Score = 30.7 bits (66), Expect = 0.75
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKART*ETRHTAKEVSC 298
ALVVD GS KAG A D +P + PS + R MV G + T T E
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSADNPT--TVFEDVT 54
Query: 299 PSNTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPKANREKMTQIMFAT 478
M ++ + + + + L PKA RE++ Q+MF T
Sbjct: 55 LDPIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFET 114
Query: 479 FNXHAMYVA 505
FN Y +
Sbjct: 115 FNVSGFYAS 123
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 301 LKYPIEHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAP-STQGQQREDDPDHVRN 477
++ PI+ G + N D +IW H F + L +AP +LLTEAP S QR D +
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 478 IQXAR-HVRRHQAVLSLYASGRTNGIVL 558
+ ++ Q+++ LY + R +L
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSIL 148
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 217
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 226
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 34.7 bits (76), Expect = 0.046
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -2
Query: 285 FAVCLVSYVRAF-CPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 109
+ + + Y+ A P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 276 YYMATLPYISAIGIPTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 33.1 bits (72), Expect = 0.14
Identities = 29/108 (26%), Positives = 43/108 (39%)
Frame = +2
Query: 260 T*ETRHTAKEVSCPSNTPSNTASSLTGMPWRRFGIIPSTMSCVSPPRNTLSCSLRLPQPK 439
T T A + PS+TPS+ S T +P + G P+T S V P +T + L P
Sbjct: 594 TPSTSPPAGHLGSPSDTPSSVVSPSTSLPAGQLGAPPATPSMVVSP-STSPPAGHLGSPS 652
Query: 440 ANREKMTQIMFATFNXHAMYVAIKPCSRCTRPVVPTVSCWTPATVSPT 583
+ + H + P S T P+ S +VSP+
Sbjct: 653 DTPSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPS 700
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 505 HQAVLSLYASGRTNGIVLDSG 567
+QAVL+LYA+ RT+GIV++ G
Sbjct: 238 NQAVLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 505 HQAVLSLYASGRTNGIVLDSG 567
+QAVL+LYA+ RT+GIV++ G
Sbjct: 238 NQAVLALYAARRTSGIVVNIG 258
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 266 PTYEPSVPYRPSRPDGGAFPRSRGT 192
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 266 PTYEPSVPYRPSRPDGGAFPRSRGT 192
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 266 PTYEPSVPYRPSRPDGGAFPRSRGT 192
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 266 PTYEPSVPYRPSRPDGGAFPRSRGT 192
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At4g31620.1 68417.m04492 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 492
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 496 HGVXVECCEHDLGHLL--SVGLGLREPQ*AGQGVPRGRHAAHCRRYDAKSSPWH 341
+G+ CC DL +L S LGLR + GQ RGR + C + K ++
Sbjct: 179 NGLTKRCCMIDLMNLSGESWTLGLRHNKRTGQAFIRGRWRSFCHANELKPGSFY 232
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.3 bits (60), Expect = 4.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 527 TRPVVPTVSCWTPA 568
+RP +PTV+CW PA
Sbjct: 1379 SRPDIPTVNCWRPA 1392
>At5g39270.1 68418.m04756 expansin, putative (EXP22) similar to
expansin - Prunus armeniaca, EMBL:U93167; alpha-expansin
gene family, PMID:11641069
Length = 261
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 544 WYDRTRTARARLDGDVHGVXVECCEHDLGHLLSVGLGL 431
WYD ARA GD+HG + C + G+L G GL
Sbjct: 42 WYD----ARATFYGDIHGGDTQPCGY--GNLFRQGYGL 73
>At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 320
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 298 AGYLFCCVPRLLRTSLLSHTDHHAL 224
AG +FCCV L T L H D +L
Sbjct: 184 AGQIFCCVGALAITGSLHHVDKDSL 208
>At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 321
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 298 AGYLFCCVPRLLRTSLLSHTDHHAL 224
AG +FCCV L T L H D +L
Sbjct: 185 AGQIFCCVGALAITGSLHHVDKDSL 209
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 316 EHGIVTNWDAMEKIWHHTFYNELRVAPEEHPVLLTEAPSTQGQQRED 456
EHGI +D EK+W F+ + +LL + T G + D
Sbjct: 234 EHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATD 280
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 222 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSAHI 100
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g63700.1 68414.m07209 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to MEK kinase
(MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848
Length = 883
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Frame = -3
Query: 290 PLLL---CASSPTYE----PSVPYRPSRPDGGAFPRSR 198
PLL+ C SPTY PSVP P+R + P SR
Sbjct: 362 PLLISNTCPFSPTYSAATSPSVPRSPARAEATVSPGSR 399
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 407 GCSSGATRSSL*K-V*CQIFSMASQLVTMPCSMGYLRGRIPLLLC 276
GC S + S + + C+ F + + T+PC Y R PL LC
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLC 572
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,509
Number of Sequences: 28952
Number of extensions: 335959
Number of successful extensions: 1075
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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