Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1503
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   5.2  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   9.0  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 212 LNRKVDNESIHSRDPWGREAGTQHCQLSLSVPATTDRLAAGK 337
           LN +++ + I  +   GR AGTQ  ++++S+P     L  GK
Sbjct: 219 LNIEIEIDRIKMKK--GRAAGTQWARINVSLPDFQSFLNLGK 258


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 245 CVCFHYLLYDSKYGIKISTTYLTVSGS 165
           C+     LYD KYG+ +   +  +  S
Sbjct: 52  CIGLELNLYDDKYGVDLQANWENLGNS 78


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 245 CVCFHYLLYDSKYGIKISTTYLTVSGS 165
           C+     LYD KYG+ +   +  +  S
Sbjct: 65  CIGLELNLYDDKYGVDLQANWENLGNS 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,361
Number of Sequences: 2352
Number of extensions: 14457
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)