Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1503
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase, TRF1-interac...    32   3.1  
AF082557-1|AAC79842.1| 1094|Homo sapiens TRF1-interacting ankyri...    32   3.1  
AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting ankyri...    32   3.1  
AB209339-1|BAD92576.1| 1055|Homo sapiens tankyrase, TRF1-interac...    32   3.1  

>BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase, TRF1-interacting
            ankyrin-related ADP-ribose polymerase protein.
          Length = 1327

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 287  GSAACPPPAPKDRDC-VCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCARP 111
            G   CP    KDR C +C   +L+     + +  ++L  S  T+K+ H+ P  H+   RP
Sbjct: 1230 GGTGCP--THKDRSCYICHRQMLFCR---VTLGKSFLQFS--TIKMAHAPPGHHSVIGRP 1282

Query: 110  KI 105
             +
Sbjct: 1283 SV 1284


>AF082557-1|AAC79842.1| 1094|Homo sapiens TRF1-interacting
            ankyrin-related ADP-ribose polymerase protein.
          Length = 1094

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 287  GSAACPPPAPKDRDC-VCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCARP 111
            G   CP    KDR C +C   +L+     + +  ++L  S  T+K+ H+ P  H+   RP
Sbjct: 997  GGTGCP--THKDRSCYICHRQMLFCR---VTLGKSFLQFS--TMKMAHAPPGHHSVIGRP 1049

Query: 110  KI 105
             +
Sbjct: 1050 SV 1051


>AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting
            ankyrin-related ADP-ribose polymerase protein.
          Length = 1327

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 287  GSAACPPPAPKDRDC-VCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCARP 111
            G   CP    KDR C +C   +L+     + +  ++L  S  T+K+ H+ P  H+   RP
Sbjct: 1230 GGTGCP--THKDRSCYICHRQMLFCR---VTLGKSFLQFS--TMKMAHAPPGHHSVIGRP 1282

Query: 110  KI 105
             +
Sbjct: 1283 SV 1284


>AB209339-1|BAD92576.1| 1055|Homo sapiens tankyrase, TRF1-interacting
            ankyrin-related ADP-ribose polymerase variant protein.
          Length = 1055

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 287  GSAACPPPAPKDRDC-VCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCARP 111
            G   CP    KDR C +C   +L+     + +  ++L  S  T+K+ H+ P  H+   RP
Sbjct: 958  GGTGCP--THKDRSCYICHRQMLFCR---VTLGKSFLQFS--TMKMAHAPPGHHSVIGRP 1010

Query: 110  KI 105
             +
Sbjct: 1011 SV 1012


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,079,762
Number of Sequences: 237096
Number of extensions: 1969556
Number of successful extensions: 3608
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3604
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)