Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1503
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001542-1|AAN71297.1|  712|Drosophila melanogaster RE10019p pro...    31   1.5  
BT001537-1|AAN71292.1|  625|Drosophila melanogaster RE08405p pro...    31   1.5  
AY118663-1|AAM50032.1|  625|Drosophila melanogaster SD10416p pro...    31   1.5  
AE014297-1600|AAN14336.1|  550|Drosophila melanogaster CG7381-PC...    31   1.5  
AE014297-1599|AAN14335.1|  625|Drosophila melanogaster CG7381-PB...    31   1.5  
AE014297-1598|AAF54878.3|  712|Drosophila melanogaster CG7381-PA...    31   1.5  

>BT001542-1|AAN71297.1|  712|Drosophila melanogaster RE10019p
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 467 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 518


>BT001537-1|AAN71292.1|  625|Drosophila melanogaster RE08405p
           protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 380 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 431


>AY118663-1|AAM50032.1|  625|Drosophila melanogaster SD10416p
           protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 380 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 431


>AE014297-1600|AAN14336.1|  550|Drosophila melanogaster CG7381-PC,
           isoform C protein.
          Length = 550

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 305 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 356


>AE014297-1599|AAN14335.1|  625|Drosophila melanogaster CG7381-PB,
           isoform B protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 380 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 431


>AE014297-1598|AAF54878.3|  712|Drosophila melanogaster CG7381-PA,
           isoform A protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 287 GSAACPPPAPKDRDCVCFHYLLYDSKYGIKISTTYLTVSGSTLKLRHSTPTSHTTCA 117
           G++ C P  P  R C C  Y LYD+   IK    Y    G+  +     P  H+ C+
Sbjct: 467 GASYCHPEIP--RRCTCEEYALYDA---IKQLCEYKRGLGAECESNDGCPVDHSVCS 518


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,725,451
Number of Sequences: 53049
Number of extensions: 633610
Number of successful extensions: 1266
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)